Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002651380.1 |
| length | 620 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 3 |
| gene id | LOC111194934 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 27378534 ~ 27381514 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230808 | lncRNA | downstream | 233825 | 27061004 ~ 27144709 (-) | True | G170506 |
| TU230813 | lncRNA | downstream | 284667 | 27078539 ~ 27093867 (-) | True | G170508 |
| TU230800 | lncRNA | downstream | 325927 | 27048035 ~ 27052607 (-) | True | G170501 |
| TU230798 | lncRNA | downstream | 343928 | 27032142 ~ 27034606 (-) | True | G170499 |
| TU230783 | lncRNA | downstream | 406411 | 26966955 ~ 26972123 (-) | True | G170485 |
| TU230859 | lncRNA | upstream | 91688 | 27473202 ~ 27476135 (-) | True | G170545 |
| TU230862 | lncRNA | upstream | 98387 | 27479901 ~ 27480422 (-) | True | G170548 |
| TU230868 | lncRNA | upstream | 114584 | 27496098 ~ 27497639 (-) | True | G170549 |
| XR_002651381.1 | lncRNA | upstream | 236173 | 27617687 ~ 27620787 (-) | True | LOC111194936 |
| TU230881 | lncRNA | upstream | 236231 | 27617745 ~ 27620783 (-) | False | LOC111194936 |
| XM_007260426.3 | mRNA | downstream | 212272 | 27148571 ~ 27166262 (-) | True | idh1 |
| XM_007260427.3 | mRNA | downstream | 237325 | 27087399 ~ 27141209 (-) | False | plekhm3 |
| XM_007260428.2 | mRNA | downstream | 237325 | 27101800 ~ 27141209 (-) | False | plekhm3 |
| XM_015608621.2 | mRNA | downstream | 238714 | 27087399 ~ 27139820 (-) | True | plekhm3 |
| XM_007260429.3 | mRNA | downstream | 308529 | 27063192 ~ 27070005 (-) | True | fzd5 |
| XM_007260423.3 | mRNA | upstream | 24839 | 27406353 ~ 27436155 (-) | True | armc8 |
| XM_007260424.3 | mRNA | upstream | 31704 | 27413218 ~ 27436155 (-) | False | armc8 |
| XM_007260422.3 | mRNA | upstream | 67004 | 27448518 ~ 27463953 (-) | True | LOC103034209 |
| XM_022680492.1 | mRNA | upstream | 88734 | 27470248 ~ 27471370 (-) | True | LOC111194935 |
| XM_022680493.1 | mRNA | upstream | 102992 | 27484506 ~ 27495517 (-) | True | lcmt2 |
| TU230416 | other | downstream | 1473052 | 25896595 ~ 25905482 (-) | False | LOC103030841 |
| TU230256 | other | downstream | 1869118 | 25502135 ~ 25509416 (-) | False | LOC111194864 |
| TU230159 | other | downstream | 3054029 | 24312583 ~ 24324505 (-) | True | G169980 |
| TU229637 | other | downstream | 4483102 | 22894768 ~ 22895432 (-) | True | G169567 |
| TU229422 | other | downstream | 5020127 | 22338439 ~ 22358407 (-) | False | man1a2 |
| TU230949 | other | upstream | 519280 | 27900794 ~ 27902899 (-) | False | LOC111194963 |
| TU231269 | other | upstream | 1304536 | 28686050 ~ 28687679 (-) | True | G170854 |
| TU231746 | other | upstream | 4518834 | 31900348 ~ 31903527 (-) | False | gabpa |
| TU232121 | other | upstream | 5377004 | 32758518 ~ 32772132 (-) | True | ndp |
| TU232221 | other | upstream | 5792539 | 33174053 ~ 33176284 (-) | True | G171553 |
