CELL TYPE: Smooth muscle cells


Distribution of Smooth muscle cells in Tissues/Organs

Word Cloud of All Markers


Function



  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Smooth muscle cells.


  • Detail Marker Information in Datasets


    Dataset ID Species Tissue / Organ Cell cluster Cell type Experiment type Sample Marker gene Marker class Evidence
    PRJNA415636 (heart, blood) Danio rerio heart, blood 11 Smooth muscle cells baseline adult, Zebrabow M, heart and blood ENSDARG00000055053 (itih1) marker DOI:10.1038/nbt.4124
    PRJNA415636 (heart, blood) Danio rerio heart, blood 11 Smooth muscle cells baseline adult, Zebrabow M, heart and blood ENSDARG00000039273 (fbln5) marker DOI:10.1038/nbt.4124
    PRJNA415636 (heart, blood) Danio rerio heart, blood 11 Smooth muscle cells baseline adult, Zebrabow M, heart and blood ENSDARG00000089187 (wfdc2) marker DOI:10.1038/nbt.4124
    PRJNA415636 (pancreas, liver) Danio rerio hepatopancreas 4 Smooth muscle cells baseline adult, Zebrabow M, pancreas and liver ENSDARG00000002701 (rasl12) marker DOI:10.1038/nbt.4124
    PRJNA415636 (pancreas, liver) Danio rerio hepatopancreas 4 Smooth muscle cells baseline adult, Zebrabow M, pancreas and liver ENSDARG00000044365 (angptl3) marker DOI:10.1038/nbt.4124
    PRJNA415636 (pancreas, liver) Danio rerio hepatopancreas 4 Smooth muscle cells baseline adult, Zebrabow M, pancreas and liver ENSDARG00000056795 (serpine1) marker DOI:10.1038/nbt.4124
    PRJNA415636 (pancreas, liver) Danio rerio hepatopancreas 4 Smooth muscle cells baseline adult, Zebrabow M, pancreas and liver ENSDARG00000062592 (myl10) marker DOI:10.1038/nbt.4124
    PRJNA415636 (pancreas, liver) Danio rerio hepatopancreas 6 Smooth muscle cells baseline adult, Zebrabow M, pancreas and liver ENSDARG00000045180 (acta2) marker DOI:10.1038/nbt.4124
    GSE150498 (untreated ctrl) Danio rerio intestine 3 Smooth muscle cells baseline 6dpf, untreated ctrl ENSDARG00000030980 (csrp1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (untreated ctrl) Danio rerio intestine 3 Smooth muscle cells baseline 6dpf, untreated ctrl ENSDARG00000086391 (cald1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (DSS treated) Danio rerio intestine 5 Smooth muscle cells disease 6dpf, DSS treated ENSDARG00000030980 (csrp1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (DSS treated) Danio rerio intestine 5 Smooth muscle cells disease 6dpf, DSS treated ENSDARG00000086391 (cald1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, untreated) Danio rerio intestine 6 Smooth muscle cells baseline 6dpf, wildtype, untreated ENSDARG00000030980 (csrp1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, untreated) Danio rerio intestine 6 Smooth muscle cells baseline 6dpf, wildtype, untreated ENSDARG00000086391 (cald1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 1X DSS) Danio rerio intestine 3 Smooth muscle cells disease 6dpf, wildtype, 1X DSS ENSDARG00000030980 (csrp1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 1X DSS) Danio rerio intestine 3 Smooth muscle cells disease 6dpf, wildtype, 1X DSS ENSDARG00000086391 (cald1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 1X DSS) Danio rerio intestine 7 Smooth muscle cells disease 6dpf, nod2-/-, 1X DSS ENSDARG00000030980 (csrp1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 1X DSS) Danio rerio intestine 7 Smooth muscle cells disease 6dpf, nod2-/-, 1X DSS ENSDARG00000086391 (cald1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 2X DSS) Danio rerio intestine 6 Smooth muscle cells disease 6dpf, wildtype, 2X DSS ENSDARG00000030980 (csrp1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 2X DSS) Danio rerio intestine 6 Smooth muscle cells disease 6dpf, wildtype, 2X DSS ENSDARG00000086391 (cald1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 2X DSS+BZA) Danio rerio intestine 5 Smooth muscle cells disease 6dpf, wildtype, 2X DSS+BZA ENSDARG00000030980 (csrp1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 2X DSS+BZA) Danio rerio intestine 5 Smooth muscle cells disease 6dpf, wildtype, 2X DSS+BZA ENSDARG00000086391 (cald1b) marker DOI:10.1038/s41586-021-03484-5
    GSE175406 Mastacembelus armatus ovotestes 2 Smooth muscle cells baseline The ovotestes of three individual 2-year-old zig-zag eels acta2 (acta2) marker DOI:10.7554/eLife.44431
    PRJNA415636 (primary pancreatic islet) Danio rerio primary pancreatic islet 3 Smooth muscle cells baseline adult, Zebrabow M, primary pancreatic islet ENSDARG00000038123 (myl9a) marker DOI:10.1038/nbt.4124
    PRJNA415636 (primary pancreatic islet) Danio rerio primary pancreatic islet 10 Smooth muscle cells baseline adult, Zebrabow M, primary pancreatic islet ENSDARG00000002701 (rasl12) marker DOI:10.1038/nbt.4124
    GSE176129 (pdgfrb-positive) Danio rerio whole body 11 Smooth muscle cells baseline 5dpf, FACS-isolated pdgfrb-positive cells ENSDARG00000045180 (acta2) marker DOI:10.7554/eLife.44431
    GSE176129 (pdgfrb-positive) Danio rerio whole body 12 Smooth muscle cells baseline 5dpf, FACS-isolated pdgfrb-positive cells ENSDARG00000045180 (acta2) marker DOI:10.7554/eLife.44431
    GSE176129 (pdgfrb-positive) Danio rerio whole body 22 Smooth muscle cells baseline 5dpf, FACS-isolated pdgfrb-positive cells ENSDARG00000045180 (acta2) marker DOI:10.7554/eLife.44431

        After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.