GENE ID: ENSDARG00000033655


Symbol Location Gene type Genome version Species
stmn1b 16: 34523515 ~ 34527206 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000033655 (stmn1b), yellow represents other genes.
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  • MARKER



    EXPRESSION


    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells Neuron (cluster: 3)
    marker
    DOI:10.7554/eLife.60005
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells Neuron (cluster: 6)
    marker
    DOI:10.7554/eLife.60005
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Neuron (cluster: 9)
    marker
    DOI:10.1016/j.neuron.2020.09.023
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Neuron (cluster: 1)
    marker
    DOI:10.1038/s41559-021-01580-3
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment Neuron (cluster: 6)
    marker
    DOI:10.1371/journal.pone.0254024
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Midbrain Glut+ (cluster: 1)
    Optic Tectum Gaba+++ (cluster: 2)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Neuron (cluster: 1)
    Neuron (cluster: 2)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Neuron (cluster: 1)
    Neuron (cluster: 2)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Neuron (cluster: 3)
    potential marker
    NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Neuron (cluster: 13)
    Neuron (cluster: 7)
    potential marker
    potential marker
    NA
    NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Neuron (cluster: 10)
    Neuron (cluster: 17)
    potential marker
    potential marker
    NA
    NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Epidermal cells (cluster: 15)
    Chondrocytes (cluster: 6)
    potential marker
    potential marker
    NA
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Oligodendrocytes (cluster: 15)
    Chondrocytes (cluster: 5)
    potential marker
    potential marker
    NA
    NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Neuron (cluster: 9)
    potential marker
    NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neuron (cluster: 5)
    potential marker
    NA
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Ionocyte progenitors (cluster: 6)
    potential marker
    NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Neuron (cluster: 2)
    potential marker
    NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Neuron (cluster: 1)
    Neuron (cluster: 11)
    potential marker
    potential marker
    NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Neuron (cluster: 13)
    Neuron (cluster: 8)
    Neuron (cluster: 9)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Neutrophils (cluster: 8)
    potential marker
    NA
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Neuron (cluster: 13)
    potential marker
    NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Neuron (cluster: 11)
    potential marker
    NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Neuron (cluster: 14)
    Placode (cluster: 15)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Neuron (cluster: 6)
    potential marker
    NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Neuron (cluster: 6)
    potential marker
    NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Neuron (cluster: 1)
    Neuron (cluster: 5)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (2dpf) head baseline 2dpf, untreatment Neuron (cluster: 4)
    potential marker
    NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Neuron (cluster: 1)
    potential marker
    NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Pancreas endocrine cells (cluster: 1)
    Pancreas endocrine cells (cluster: 3)
    potential marker
    potential marker
    NA
    NA
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Enteric neuron (cluster: 13)
    potential marker
    NA
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS Enteric neuron (cluster: 10)
    potential marker
    NA
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS Enteric neuron (cluster: 14)
    potential marker
    NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Neuron (cluster: 3)
    Microvillus olfactory sensory neuron (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Microvillus olfactory sensory neuron (cluster: 5)
    Neuron (cluster: 6)
    potential marker
    potential marker
    NA
    NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Microvillus olfactory sensory neuron (cluster: 3)
    Neuron (cluster: 5)
    potential marker
    potential marker
    NA
    NA
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 Somatolactotropes (cluster: 1)
    potential marker
    NA
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis Somatolactotropes (cluster: 1)
    potential marker
    NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Pancreas endocrine cells (cluster: 1)
    potential marker
    NA
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg Bipolar cells (cluster: 13)
    Bipolar cells (cluster: 5)
    potential marker
    potential marker
    NA
    NA
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment Bipolar cells (cluster: 5)
    Retinal ganglion cells (cluster: 6)
    potential marker
    potential marker
    NA
    NA
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment Amacrine cells (cluster: 2)
    Retinal ganglion cells (cluster: 5)
    potential marker
    potential marker
    NA
    NA
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment Retinal ganglion cells (cluster: 8)
    potential marker
    NA
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment Amacrine cells (cluster: 2)
    Retinal ganglion cells (cluster: 8)
    Amacrine cells (cluster: 2)
    Retinal ganglion cells (cluster: 8)
    potential marker
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    NA
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih Retinal ganglion cells (cluster: 6)
    potential marker
    NA
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih Retinal ganglion cells (cluster: 6)
    Horizontal cells (cluster: 7)
    potential marker
    potential marker
    NA
    NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Thyrocytes (cluster: 7)
    potential marker
    NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Schwann cells (cluster: 1)
    Chromaffin cells (cluster: 11)
    Neuron (cluster: 13)
    Neuron (cluster: 15)
    potential marker
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Neuron (cluster: 2)
    Neuron (cluster: 23)
    potential marker
    potential marker
    NA
    NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Neuron (cluster: 10)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Neuron (cluster: 4)
    potential marker
    NA
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Neuron (cluster: 12)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/- Neuron (cluster: 5)
    potential marker
    NA
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Epidermal cells (cluster: 14)
    Neuron (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Neuron (cluster: 9)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Neuron (cluster: 11)
    Epidermal cells (cluster: 13)
    potential marker
    potential marker
    NA
    NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
    GSE151354 (wild type) cartilage baseline 21dpf, wild type
    GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
    GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled)
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)