Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007236777.3 |
| length | 1097 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 3 |
| gene id | lipt2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 25072302 ~ 25086749 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0009107 | lipoate biosynthetic process | biological_process |
| GO:0006464 | cellular protein modification process | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0016415 | octanoyltransferase activity | molecular_function |
| GO:0016874 | ligase activity | molecular_function |
| GO:0033819 | lipoyl(octanoyl) transferase activity | molecular_function |
| id | description |
|---|---|
| K23735 | LIPT2, LIP2; lipoyl(octanoyl) transferase 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18083 | lncRNA | upstream | 25340 | 25057993 ~ 25058489 (+) | True | G13462 |
| TU18079 | lncRNA | upstream | 34756 | 25047338 ~ 25049073 (+) | True | G13458 |
| TU18076 | lncRNA | upstream | 50453 | 25032901 ~ 25033376 (+) | True | G13455 |
| TU17750 | lncRNA | upstream | 357663 | 24723838 ~ 24726166 (+) | True | G13214 |
| TU17748 | lncRNA | upstream | 369866 | 24713326 ~ 24713963 (+) | True | G13212 |
| TU18117 | lncRNA | downstream | 32740 | 25119489 ~ 25120520 (+) | True | G13491 |
| TU18132 | lncRNA | downstream | 96556 | 25183305 ~ 25183545 (+) | True | G13504 |
| TU18144 | lncRNA | downstream | 144233 | 25230982 ~ 25231843 (+) | True | G13514 |
| TU18149 | lncRNA | downstream | 160247 | 25246996 ~ 25338425 (+) | False | LOC103040166 |
| TU18151 | lncRNA | downstream | 160247 | 25246996 ~ 25338425 (+) | False | LOC103040166 |
| XM_007236783.3 | mRNA | upstream | 101798 | 24980195 ~ 24982031 (+) | True | LOC103027752 |
| XM_022675363.1 | mRNA | upstream | 210703 | 24789276 ~ 24873126 (+) | True | LOC103028424 |
| XM_022677946.1 | mRNA | upstream | 307368 | 24738891 ~ 24776461 (+) | True | kiaa0753 |
| XM_022675359.1 | mRNA | upstream | 361153 | 24700842 ~ 24722676 (+) | True | ccdc9 |
| XM_022675350.1 | mRNA | upstream | 525225 | 24519162 ~ 24558604 (+) | True | tbx4 |
| XM_022677957.1 | mRNA | downstream | 61528 | 25148277 ~ 25161641 (+) | True | LOC111194299 |
| XM_007236732.2 | mRNA | downstream | 248171 | 25334920 ~ 25339435 (+) | False | LOC103040166 |
| XM_022675409.1 | mRNA | downstream | 248449 | 25335198 ~ 25339435 (+) | True | LOC103040166 |
| XM_007236735.3 | mRNA | downstream | 281945 | 25368694 ~ 25378622 (+) | True | eif4h |
| XM_015602311.2 | mRNA | downstream | 281945 | 25368694 ~ 25378622 (+) | False | eif4h |
| TU18064 | other | upstream | 27726 | 25052513 ~ 25056103 (+) | True | G13445 |
| TU17784 | other | upstream | 226807 | 24855933 ~ 24857022 (+) | True | G13237 |
| TU17745 | other | upstream | 366603 | 24714351 ~ 24717226 (+) | False | ccdc9 |
| TU17747 | other | upstream | 366603 | 24715890 ~ 24717226 (+) | False | ccdc9 |
| TU17542 | other | upstream | 1228476 | 23853998 ~ 23855353 (+) | True | G13067 |
| TU18257 | other | downstream | 581999 | 25668748 ~ 25673189 (+) | False | mfrp |
| TU18843 | other | downstream | 1922799 | 27009548 ~ 27040529 (+) | True | G14047 |
| TU19049 | other | downstream | 2963380 | 28050129 ~ 28056900 (+) | False | LOC103031366 |
| TU19373 | other | downstream | 4042318 | 29129067 ~ 29129373 (+) | True | G14444 |
| TU19421 | other | downstream | 4308411 | 29395160 ~ 29398166 (+) | True | G14480 |
