RNA id: TU45936



Basic Information


Item Value
RNA id TU45936
length 247
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G40503
representative True

Chromosome Information


Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 7231606 ~ 7231852 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTTGAATCTTCCGCTCCGTCTGCCTGTTCACCTGTGGGTGGTATCCTGAGGAGAGGCTGACGGTCACACCTAGGAGTGCGAAGAAGGCCTTCCAGACCCTGGAGATGAACTGTGGCCCTCTATCTGATACAATGTCCTCAGGAATTCCATAATATCTGAAGATATGGTTAAACATAAGTTCAGCAGTCTCCATGGCCATGGGCAGTCCCCTTAAAGGAATCAGACGACATGACTTAGAAAATCTGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45932 lncRNA downstream 8713 7222607 ~ 7222893 (-) True G40499
TU45930 lncRNA downstream 11247 7220011 ~ 7220359 (-) True G40497
TU45891 lncRNA downstream 75991 7155361 ~ 7155615 (-) True G40472
TU45804 lncRNA downstream 166306 7060587 ~ 7065300 (-) True G40402
TU45820 lncRNA downstream 231734 6999253 ~ 6999872 (-) True G40408
TU45956 lncRNA upstream 51869 7283721 ~ 7284935 (-) False G40518
TU45954 lncRNA upstream 52123 7283975 ~ 7284935 (-) False G40518
TU45953 lncRNA upstream 52711 7284563 ~ 7284935 (-) True G40518
TU45985 lncRNA upstream 53462 7285314 ~ 7287242 (-) True G40520
TU45965 lncRNA upstream 60220 7292072 ~ 7292580 (-) False G40519
CI01000005_07190084_07218097.mRNA mRNA downstream 13473 7189596 ~ 7218133 (-) True CI01000005_07190084_07218097
CI01000005_07143500_07144465.mRNA mRNA downstream 87041 7143482 ~ 7144565 (-) True CI01000005_07143500_07144465
CI01000005_07111233_07112234.mRNA mRNA downstream 119340 7110722 ~ 7112266 (-) True CI01000005_07111233_07112234
CI01000005_07093538_07094533.mRNA mRNA downstream 137037 7093482 ~ 7094569 (-) True CI01000005_07093538_07094533
CI01000005_07052874_07068345.mRNA mRNA downstream 163229 7052730 ~ 7068377 (-) True CI01000005_07052874_07068345
CI01000005_07355833_07360372.mRNA mRNA upstream 123981 7355833 ~ 7360372 (-) True CI01000005_07355833_07360372
CI01000005_07373961_07374634.mRNA mRNA upstream 141558 7373410 ~ 7374634 (-) True CI01000005_07373961_07374634
CI01000005_07398684_07399164.mRNA mRNA upstream 166635 7398487 ~ 7399164 (-) True CI01000005_07398684_07399164
CI01000005_07436839_07437813.mRNA mRNA upstream 204213 7436065 ~ 7438424 (-) True CI01000005_07436839_07437813
CI01000005_07591912_07592984.mRNA mRNA upstream 360060 7591912 ~ 7592991 (-) True CI01000005_07591912_07592984
TU45920 other downstream 35178 7195795 ~ 7196428 (-) True G40487
TU45564 other downstream 748117 6480689 ~ 6483489 (-) True G40190
TU44763 other downstream 1397067 5833792 ~ 5834539 (-) True G39515
TU44762 other downstream 1397214 5833792 ~ 5834392 (-) False G39515
TU43542 other downstream 2830496 4381238 ~ 4401110 (-) True G38415
TU46013 other upstream 294369 7526221 ~ 7532148 (-) True G40540

Expression Profile