RNA id: CI01000026_11075931_11078249.mRNA



Basic Information


Item Value
RNA id CI01000026_11075931_11078249.mRNA
length 795
RNA type mRNA
GC content 0.47
exon number 4
gene id CI01000026_11075931_11078249
representative False

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11075784 ~ 11079080 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATATTAAAAGGGCAAAGTAACGTCTCAGCATAGATGGCTCGATTACTGTCCTGCCCTTTGATAATGGTACTTATGACAGAAATTGTTCATTTACTGAAAACTACAATTTAGCTCTGCAGCAGCTGATTAATCTGTGTGTTTTTCAGAATGCGTGGCCTGTTTTCCACCCTCATCGTTGTGCTGGTGGCCTTAATGATCGTGACTACAGAGGCTGGGAAAAACAAGAAAGAGAGGAATAGGGGGGTTAACGGTGGTGCGGACTGTGCGGAGTGGCGCTATGGCATCTGCGTGGCCAATAACGGAGACTGTGGACCAGGCATAAGGGAGGGCACCTGCAACGAGAATACCAAAAAACTCAAATGCAGAGTTCCCTGCAACTGGAAGAAAGAGTTTGGAGCTGACTGCAAGTATAAGTTTGGTAACTGGGGTGAGTGTGACGCAGCCACGAGCACAAAGAGCCGCACCGGCACTCTGCAAAAGGCTCTCTTCAACGTCGACTGTCAGCAAACCATCTCTGTGTCCAAACCCTGCACCACCAAGGTCAAAAACAAACCCAAAGGAAAGAAAAACAAGGGAAAAGGGAACTAAAGGGAGCAAGAGATCCAGAGGAGCAGTAAACACCACGTGATCATCCGTCATCCAGACACGGCCTTTTATATCTCTACTCAGTGTTCTTCAGCTTGAACGGGACTTGCTCTACAGCCACAAACACATAGCTTTAGAAGACTATGACAGAGTAACGTCTGAGTATTTGACACCTTACATGACTCTTTCATGTGTGAGGGAGAGGGGAGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU151691 lncRNA upstream 168109 10907475 ~ 10907675 (+) True G133426
TU151685 lncRNA upstream 180625 10886053 ~ 10895159 (+) True G133420
TU151669 lncRNA upstream 290222 10784792 ~ 10785562 (+) True G133406
TU151646 lncRNA upstream 447708 10552960 ~ 10628076 (+) True G133383
TU151635 lncRNA upstream 560136 10515420 ~ 10515648 (+) True G133373
TU151707 lncRNA downstream 40255 11118711 ~ 11119022 (+) True G133442
TU151708 lncRNA downstream 41192 11119648 ~ 11119877 (+) True G133443
TU151709 lncRNA downstream 42053 11120509 ~ 11120750 (+) True G133444
TU151725 lncRNA downstream 65853 11144309 ~ 11153397 (+) True G133454
TU151771 lncRNA downstream 114905 11193361 ~ 11193825 (+) True G133491
CI01000026_11032284_11063044.mRNA mRNA upstream 12159 11031679 ~ 11063625 (+) True CI01000026_11032284_11063044
CI01000026_11012960_11021926.mRNA mRNA upstream 53858 11011340 ~ 11021926 (+) True CI01000026_11012960_11021926
CI01000026_10955581_10955874.mRNA mRNA upstream 119871 10954814 ~ 10955913 (+) True CI01000026_10955581_10955874
CI01000026_10930798_10950198.mRNA mRNA upstream 125471 10930798 ~ 10950313 (+) True CI01000026_10930798_10950198
CI01000026_10917489_10918872.mRNA mRNA upstream 156588 10915851 ~ 10919196 (+) True CI01000026_10917489_10918872
CI01000026_11203781_11212074.mRNA mRNA downstream 125325 11203781 ~ 11212582 (+) True CI01000026_11203781_11212074
CI01000026_11239339_11240254.mRNA mRNA downstream 160883 11239339 ~ 11240433 (+) True CI01000026_11239339_11240254
CI01000026_11241496_11246081.mRNA mRNA downstream 163040 11241496 ~ 11246081 (+) False CI01000026_11241496_11246081
CI01000026_11262923_11264188.mRNA mRNA downstream 182625 11261081 ~ 11264534 (+) True CI01000026_11262923_11264188
CI01000026_11266022_11278889.mRNA mRNA downstream 187566 11266022 ~ 11278899 (+) True CI01000026_11266022_11278889
TU151441 other upstream 913823 10159819 ~ 10161961 (+) True G133192
TU150881 other upstream 1506624 9568739 ~ 9569160 (+) False G132667
TU149067 other upstream 2568997 8501408 ~ 8506787 (+) True G131077
TU148972 other upstream 2776370 8298573 ~ 8299414 (+) False CI01000026_08297901_08307596
TU148937 other upstream 2886711 8188374 ~ 8189073 (+) True G130967
TU151777 other downstream 166477 11244933 ~ 11255073 (+) True G133497
TU151829 other downstream 397661 11476117 ~ 11476907 (+) False G133542

Expression Profile