Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00031654 |
| length | 995 |
| lncRNA type | retained_intron |
| GC content | 0.39 |
| exon number | 2 |
| gene id | XLOC_015976 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 55982300 ~ 55990329 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005575 | cellular_component | cellular_component |
| GO:0016301 | kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040912-44 | Predicted to enable ribosylnicotinamide kinase activity. Predicted to be active in cytoplasm. Orthologous to human NMRK2 (nicotinamide riboside kinase 2). |
| ensembl_id | ENSDART00000140440 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033721 | lncRNA | upstream | 198504 | 55782537 ~ 55784445 (+) | True | XLOC_015974 |
| TCONS_00033720 | lncRNA | upstream | 202912 | 55777822 ~ 55780037 (+) | True | XLOC_015973 |
| TCONS_00033325 | lncRNA | upstream | 379384 | 55603128 ~ 55603565 (+) | True | XLOC_015971 |
| TCONS_00033719 | lncRNA | upstream | 713659 | 55268020 ~ 55269290 (+) | True | XLOC_015968 |
| TCONS_00033324 | lncRNA | upstream | 760051 | 55222687 ~ 55222898 (+) | True | XLOC_015966 |
| TCONS_00031657 | lncRNA | downstream | 605 | 55984621 ~ 55990322 (+) | False | XLOC_015976 |
| TCONS_00033723 | lncRNA | downstream | 140987 | 56125003 ~ 56130443 (+) | False | XLOC_015978 |
| TCONS_00033724 | lncRNA | downstream | 141152 | 56125168 ~ 56130443 (+) | False | XLOC_015978 |
| TCONS_00033725 | lncRNA | downstream | 141155 | 56125171 ~ 56126826 (+) | True | XLOC_015978 |
| TCONS_00033326 | lncRNA | downstream | 188077 | 56172093 ~ 56172528 (+) | True | XLOC_015981 |
| TCONS_00031647 | mRNA | upstream | 11979 | 55914699 ~ 55970970 (+) | False | XLOC_015975 |
| TCONS_00031650 | mRNA | upstream | 34739 | 55916911 ~ 55948210 (+) | False | XLOC_015975 |
| TCONS_00031649 | mRNA | upstream | 34739 | 55916911 ~ 55948210 (+) | False | XLOC_015975 |
| TCONS_00031648 | mRNA | upstream | 34739 | 55916911 ~ 55948210 (+) | True | XLOC_015975 |
| TCONS_00031646 | mRNA | upstream | 309724 | 55665323 ~ 55673225 (+) | True | XLOC_015972 |
| TCONS_00031658 | mRNA | downstream | 772 | 55984788 ~ 55989693 (+) | True | XLOC_015976 |
| TCONS_00031659 | mRNA | downstream | 28000 | 56012016 ~ 56041890 (+) | False | XLOC_015977 |
| TCONS_00031660 | mRNA | downstream | 28054 | 56012070 ~ 56040091 (+) | True | XLOC_015977 |
| TCONS_00031661 | mRNA | downstream | 155925 | 56139941 ~ 56162607 (+) | False | XLOC_015979 |
| TCONS_00031664 | mRNA | downstream | 184603 | 56168619 ~ 56237133 (+) | False | XLOC_015980 |
| TCONS_00031635 | other | upstream | 1196209 | 54755172 ~ 54786740 (+) | False | XLOC_015963 |
| TCONS_00031622 | other | upstream | 2296761 | 53686071 ~ 53686188 (+) | True | XLOC_015951 |
| TCONS_00031613 | other | upstream | 3843253 | 52122720 ~ 52139696 (+) | True | XLOC_015939 |
| TCONS_00031589 | other | upstream | 5091005 | 50862527 ~ 50891944 (+) | False | XLOC_015923 |
| TCONS_00031582 | other | upstream | 5392501 | 50590332 ~ 50590448 (+) | True | XLOC_015919 |
| TCONS_00031662 | other | downstream | 155956 | 56139972 ~ 56162604 (+) | True | XLOC_015979 |
| TCONS_00031668 | other | downstream | 479195 | 56463211 ~ 56476884 (+) | True | XLOC_015985 |
| TCONS_00031669 | other | downstream | 503652 | 56487668 ~ 56493661 (+) | True | XLOC_015986 |
| TCONS_00031670 | other | downstream | 513878 | 56497894 ~ 56507389 (+) | True | XLOC_015987 |
| TCONS_00031672 | other | downstream | 854665 | 56838681 ~ 56838799 (+) | True | XLOC_015991 |
