Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004264 |
| length | 1037 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 3 |
| gene id | XLOC_002220 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 31222433 ~ 31230014 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008150 | biological_process | biological_process |
| GO:0042995 | cell projection | cellular_component |
| GO:0005929 | cilium | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1232 | Predicted to be located in cilium and membrane. Predicted to be integral component of membrane. Orthologous to human TMEM218 (transmembrane protein 218). |
| ensembl_id | ENSDART00000185080 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00004263 | lncRNA | upstream | 234329 | 30978386 ~ 30988104 (+) | False | XLOC_002219 |
| TCONS_00005911 | lncRNA | upstream | 234358 | 30978552 ~ 30988075 (+) | True | XLOC_002219 |
| TCONS_00004260 | lncRNA | upstream | 681352 | 30498081 ~ 30541081 (+) | True | XLOC_002216 |
| TCONS_00005910 | lncRNA | upstream | 1310852 | 29906226 ~ 29911581 (+) | False | XLOC_002215 |
| TCONS_00005908 | lncRNA | upstream | 1315411 | 29893626 ~ 29907022 (+) | False | XLOC_002215 |
| TCONS_00005719 | lncRNA | downstream | 513266 | 31742998 ~ 31768953 (+) | True | XLOC_002226 |
| TCONS_00005720 | lncRNA | downstream | 639550 | 31869282 ~ 31942176 (+) | False | XLOC_002228 |
| TCONS_00005912 | lncRNA | downstream | 717105 | 31946837 ~ 31948544 (+) | True | XLOC_002229 |
| TCONS_00005913 | lncRNA | downstream | 1030011 | 32259743 ~ 32264298 (+) | True | XLOC_002234 |
| TCONS_00005914 | lncRNA | downstream | 1354685 | 32584417 ~ 32592071 (+) | True | XLOC_002237 |
| TCONS_00004259 | mRNA | upstream | 633261 | 29963686 ~ 30589172 (+) | False | XLOC_002216 |
| TCONS_00004258 | mRNA | upstream | 633261 | 29963686 ~ 30589172 (+) | False | XLOC_002216 |
| TCONS_00004257 | mRNA | upstream | 643049 | 29963616 ~ 30579384 (+) | False | XLOC_002216 |
| TCONS_00004256 | mRNA | upstream | 646344 | 29963518 ~ 30576089 (+) | False | XLOC_002216 |
| TCONS_00004253 | mRNA | upstream | 1334569 | 29855213 ~ 29887864 (+) | False | XLOC_002211 |
| TCONS_00004267 | mRNA | downstream | 14887 | 31244619 ~ 31280549 (+) | False | XLOC_002221 |
| TCONS_00004268 | mRNA | downstream | 14942 | 31244674 ~ 31284790 (+) | False | XLOC_002221 |
| TCONS_00004269 | mRNA | downstream | 18304 | 31248036 ~ 31253864 (+) | True | XLOC_002221 |
| TCONS_00004270 | mRNA | downstream | 114495 | 31344227 ~ 31345690 (+) | True | XLOC_002222 |
| TCONS_00004271 | mRNA | downstream | 394411 | 31624143 ~ 31634427 (+) | True | XLOC_002223 |
| TCONS_00004262 | other | upstream | 462389 | 30759929 ~ 30760044 (+) | True | XLOC_002218 |
| TCONS_00004261 | other | upstream | 486165 | 30736148 ~ 30736268 (+) | True | XLOC_002217 |
| TCONS_00004255 | other | upstream | 1310737 | 29910622 ~ 29911696 (+) | True | XLOC_002215 |
| TCONS_00004250 | other | upstream | 1370191 | 29852147 ~ 29852242 (+) | True | XLOC_002214 |
| TCONS_00004249 | other | upstream | 1371338 | 29851000 ~ 29851095 (+) | True | XLOC_002213 |
| TCONS_00004273 | other | downstream | 462930 | 31692662 ~ 31692776 (+) | True | XLOC_002225 |
| TCONS_00004283 | other | downstream | 1166048 | 32395780 ~ 32395896 (+) | True | XLOC_002235 |
| TCONS_00004290 | other | downstream | 1772587 | 33002319 ~ 33002433 (+) | True | XLOC_002241 |
| TCONS_00004303 | other | downstream | 2472710 | 33702442 ~ 33710220 (+) | True | XLOC_002250 |
| TCONS_00004313 | other | downstream | 2805957 | 34035689 ~ 34043319 (+) | True | XLOC_002255 |
