Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00069704 |
| length | 528 |
| RNA type | nonsense_mediated_decay |
| GC content | 0.48 |
| exon number | 5 |
| gene id | XLOC_035540 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007119.7 |
| NCBI id | CM002892.2 |
| chromosome length | 54304671 |
| location | 17069577 ~ 17075398 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:1905273 | positive regulation of proton-transporting ATP synthase activity, rotational mechanism | biological_process |
| GO:0018023 | peptidyl-lysine trimethylation | biological_process |
| GO:1905706 | regulation of mitochondrial ATP synthesis coupled proton transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0016279 | protein-lysine N-methyltransferase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-081104-341 | Predicted to enable protein-lysine N-methyltransferase activity. Predicted to be involved in peptidyl-lysine trimethylation; positive regulation of proton-transporting ATP synthase activity, rotational mechanism; and regulation of mitochondrial ATP synthesis coupled proton transport. Predicted to act upstream of or within methylation. Predicted to be located in mitochondrial membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. |
| ensembl_id | ENSDART00000147679 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00072171 | lncRNA | upstream | 10200 | 17055879 ~ 17059377 (+) | True | XLOC_035539 |
| TCONS_00069700 | lncRNA | upstream | 305946 | 16758464 ~ 16763631 (+) | True | XLOC_035536 |
| TCONS_00069697 | lncRNA | upstream | 313860 | 16744062 ~ 16755717 (+) | False | XLOC_035535 |
| TCONS_00069698 | lncRNA | upstream | 320711 | 16744356 ~ 16748866 (+) | True | XLOC_035535 |
| TCONS_00072170 | lncRNA | upstream | 348201 | 16719107 ~ 16721376 (+) | True | XLOC_035533 |
| TCONS_00072172 | lncRNA | downstream | 13620 | 17086991 ~ 17097453 (+) | False | XLOC_035542 |
| TCONS_00072173 | lncRNA | downstream | 13638 | 17087009 ~ 17126339 (+) | False | XLOC_035542 |
| TCONS_00072174 | lncRNA | downstream | 294670 | 17368041 ~ 17407080 (+) | True | XLOC_035546 |
| TCONS_00072175 | lncRNA | downstream | 889458 | 17962829 ~ 17968234 (+) | True | XLOC_035551 |
| TCONS_00071922 | lncRNA | downstream | 1337613 | 18410984 ~ 18412028 (+) | True | XLOC_035556 |
| TCONS_00069702 | mRNA | upstream | 24863 | 16990120 ~ 17044714 (+) | False | XLOC_035538 |
| TCONS_00069703 | mRNA | upstream | 24923 | 17009199 ~ 17044654 (+) | True | XLOC_035538 |
| TCONS_00069699 | mRNA | upstream | 299779 | 16758304 ~ 16769798 (+) | False | XLOC_035536 |
| TCONS_00069696 | mRNA | upstream | 312292 | 16738321 ~ 16757285 (+) | False | XLOC_035535 |
| TCONS_00069695 | mRNA | upstream | 321061 | 16738282 ~ 16748516 (+) | False | XLOC_035535 |
| TCONS_00069706 | mRNA | downstream | 5321 | 17078692 ~ 17086195 (+) | True | XLOC_035541 |
| TCONS_00069708 | mRNA | downstream | 70130 | 17143501 ~ 17157074 (+) | True | XLOC_035543 |
| TCONS_00069709 | mRNA | downstream | 94505 | 17167876 ~ 17173694 (+) | False | XLOC_035544 |
| TCONS_00069710 | mRNA | downstream | 94743 | 17168114 ~ 17173447 (+) | True | XLOC_035544 |
| TCONS_00069711 | mRNA | downstream | 111231 | 17184602 ~ 17193041 (+) | False | XLOC_035545 |
| TCONS_00069701 | other | upstream | 259324 | 16772174 ~ 16810253 (+) | True | XLOC_035537 |
| TCONS_00069690 | other | upstream | 381115 | 16676937 ~ 16688462 (+) | False | XLOC_035532 |
| TCONS_00069685 | other | upstream | 989784 | 16023470 ~ 16079793 (+) | False | XLOC_035526 |
| TCONS_00069678 | other | upstream | 1794140 | 15269863 ~ 15275437 (+) | True | XLOC_035523 |
| TCONS_00069676 | other | upstream | 1810160 | 15254605 ~ 15259417 (+) | True | XLOC_035522 |
| TCONS_00069707 | other | downstream | 13689 | 17087060 ~ 17097065 (+) | True | XLOC_035542 |
| TCONS_00069740 | other | downstream | 1596866 | 18670237 ~ 18670362 (+) | True | XLOC_035562 |
| TCONS_00069742 | other | downstream | 1949890 | 19023261 ~ 19023377 (+) | True | XLOC_035565 |
| TCONS_00069748 | other | downstream | 2430656 | 19504027 ~ 19509241 (+) | True | XLOC_035569 |
| TCONS_00069759 | other | downstream | 2878362 | 19951733 ~ 19952380 (+) | False | XLOC_035578 |
