RNA id: XM_039779724.1


Basic Information

Item Value
RNA id XM_039779724.1
length 1693
RNA type mRNA
GC content 0.57
exon number 10
gene id ckmt2a
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 29669572 ~ 29690308 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATTGGTTTGTTTCTGGACTTATGATTGGCTCCCGGGGTTTTAATCCCACATGAGGGGGGCGGAGTCCCCTTGAGAGAGGAGAGTGAAAAGCTCTTTAACAAGAGACCTTCAGCAAGAAGGCAGAGCAGCTTCCCTACAGctCATTTCTTACTGACAAAAAGAGTCAACAACCATCAGAAAGATGGCGAGTTCTTTCACACGCTTGATCTCCGGCCGAAACACGGCAGCTCTGTTGGCCAGCTTGGGCGCAGGAACGATGGCCGCTGGCTTCCTGATGAGCGAAACTGGCCCCCTGGCTGCTGATAAGAAGACGAAGCTCTATCCCCCCAGCTCGGACTTCCCCGACCTGAGGAAACACAACAACTGCATGGCCGCGGCTCTGACTCCCGCCATTTATGCCAAACTGAGGGACAAGGTCACCCCCAACAACTGGACCCTGGACCAGAGCATCCAAACCGGAGTGGACAACCCTGGGCACCCGTTCATCAAGACGGTGGGCTGTGTGGCTGGCGACGAGGAGAGCTACGAGGTGTTTGCTGAGCTCTTTGACCCCGTCATCAAAGACCGGCACAACGGCTACGACCCCAGAACCATGAAACACCCGACCGACCTGGACTCCTCCAAGATAACCAACGCCGTGTTCGACGAAAACTACGTCCTGTCGTCCCGTGTCCGCACCGGCCGCAGTATCCGCGGGCTGAGCCTGCCCCCGGCCTGTTCCAGGGCCGAGCGTCGGGAGGTGGAGCGCGTGGTCGTGACGGCCCTGGCCGGCCTGAAGGGAGACCTGGCCGGACGCTACTACGGCCTGGGAGACATGACCGagaaggagcagcagcagctcattGATGACCACTTCCTGTTTGACAAGCCCGTGTCTCCGTTACTCACCTCGGCCTTCATGGCCCGAGACTGGCCCGATTCCAGGGGGATCTGGCACAACAACGAGAAGACCTTCCTGATCTGGGTGAATGAGGAGGACCACACCAGAGTCATCTCCATGGAGAAGGGAGGCAACATGAAGAGAGTGTTTGAGAGATTCTGCAGAGGACTTAAACAGGTAGAGCACCTGATCCAGGAGAGAGGCTGGGAGTTCATGTGGAACGAGCGTCTGGGCTACATCCTCACATGTCCCTCCAACCTGGGCACCGGCCTCAGGGCGGGGGTGCATGTGCGCCTGCCAAAACTCagccagGACCCTCGTTTCTCCAAAATCCTCGACAACCTGCGGCTGCAGAAAAGAGGCACCGGTGGCGTGGATACGGCCGCTACCGGAGACACCTTTGACATTTCCAACAACGACCGTCTCGGCAAATCTGAGGTGGAGCTGGTCCAGCTATTGGTCGATGGGGTCAACCACCTGATTGAGTGTGAGAAGAAGCTCGAGAAGGGACAGGACATCAAAGTCCCTGCTCCCATTACTCAGTTCAGGAAGTAAAAGCCCGATGCATGGGTGCTTCAGTgtcagcaggggggggggggcgctctCTGCTCGGGGCTCCCCTCCCGAACCTCAGAACGACGTCAGTCCACTGCTACAGAACAGGGGGAGCTTTCTTTATTCCTCCTCCCGACGATTGCAAAATCTTTAGGCGAACCTAATCTTAAACATGAACTGCAGTTAGGGAGCGATTCTACCTCATGTTTAAGGTCCTCACTGTAAGCCTGACTTCAATAAAACCAACCGTATTAAACA

Function

GO: NA

KEGG:

id description
K00933 E2.7.3.2; creatine kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU241973 lncRNA upstream 2364 29666778 ~ 29667208 (+) False rasgrf2a
TU241959 lncRNA upstream 124831 29544159 ~ 29544741 (+) True G178728
TU241945 lncRNA upstream 138213 29528425 ~ 29531359 (+) True G178725
TU241920 lncRNA upstream 211036 29445053 ~ 29458536 (+) True G178710
TU241662 lncRNA upstream 587390 29060620 ~ 29082182 (+) False ptpn11a
TU242082 lncRNA downstream 2130 29692438 ~ 29701839 (+) True G178835
TU242097 lncRNA downstream 52315 29742623 ~ 29750295 (+) False G178845
TU242102 lncRNA downstream 52315 29742623 ~ 29743330 (+) False G178845
TU242103 lncRNA downstream 52315 29742623 ~ 29743330 (+) False G178845
TU242104 lncRNA downstream 52315 29742623 ~ 29750295 (+) False G178845
XM_039779058.1 mRNA upstream 2341 29601531 ~ 29667231 (+) True rasgrf2a
XM_039778902.1 mRNA upstream 81932 29584043 ~ 29587640 (+) True LOC120544985
XM_039780776.1 mRNA upstream 101323 29553358 ~ 29568249 (+) True oclna
XM_039780217.1 mRNA upstream 121550 29535796 ~ 29548022 (+) False marveld2a
XM_039780215.1 mRNA upstream 121679 29535795 ~ 29547893 (+) False marveld2a
XM_039779059.1 mRNA downstream 50124 29740432 ~ 29790668 (+) True zfyve16
XM_039779735.1 mRNA downstream 103496 29793804 ~ 29795825 (+) True LOC120545429
XM_039779722.1 mRNA downstream 141055 29831363 ~ 29841705 (+) True sec14l7
XM_039779060.1 mRNA downstream 156045 29846353 ~ 29882921 (+) True LOC120545067
XM_039779699.1 mRNA downstream 205369 29895677 ~ 29925265 (+) True LOC120545406
TU241682 other upstream 577246 29084949 ~ 29092326 (+) True G178529
TU241633 other upstream 724128 28944507 ~ 28945444 (+) True G178506
XR_005636601.1 other upstream 1081546 28580268 ~ 28588026 (+) False LOC120544907
XR_005636773.1 other upstream 1971640 27656536 ~ 27697932 (+) False lhfpl2a
TU241015 other upstream 2658177 27010197 ~ 27011395 (+) False nln
TU242100 other downstream 52315 29742623 ~ 29744075 (+) True G178845
TU242091 other downstream 103836 29794144 ~ 29795314 (+) False LOC120545429
TU242148 other downstream 331011 30021319 ~ 30022217 (+) True G178881
TU242149 other downstream 331011 30021319 ~ 30022217 (+) False G178881
XR_005636691.1 other downstream 574075 30264383 ~ 30310894 (+) True zmiz2

Expression Profile