RNA id: XM_039780630.1


Basic Information

Item Value
RNA id XM_039780630.1
length 2664
RNA type mRNA
GC content 0.50
exon number 8
gene id arsb
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 27633737 ~ 27652089 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATCTGCGGAACACGGAAGTGACAGGCAGACGCGGTTGAAACTTTTATAGTTCAGTCATTTACATGAGATATTATTACAACGAAGTCATGAAGTTACGACAACCACTTAGCTAAGCCTCATATCCGCCATGTTTATCTTTCTTTTACCGTTAAATACAACCAAACAGACGTCCTCGTGTACTTTGTGACAAACTAGTTCATAACTAAGAAACTTGACGATGGATAGAACACCGTTAGCTTATTCGCTTATAATAGCCGCGATTCTCGTAAGCTTTCCTGTGGTGTTAGCGGCTCAGCAGCCCAACATCGTGGTTATCCTGGCAGATGACTTCGGTTGGCATGATGTCGGCTACCACAGCTCGGAGATCAGCACCCCGAACCTGGACAAGCTGTCAGCAGCAGGAGTCCGCCTGGAGAACTACTATGTTCAGCCTCTGTGTACCCCCTCCAGGAACCAGCTGATGACCGGGAGATACCAGATCCACACGGGCATGCAGCATCAGATCATCTGGCCCTGTCAGCCCTACTGTGTGCCTCTGGATGAGAAAATGCTGCCCCAGCTGATGAAGGAGGCGGGGTACGCCACGCACATGGTGGGCAAGTGGCACCTGGGCATGTACAAGAAGGACTGCCTGCCCACACGCCGCGGCTTTGACACATACTTTGGCTACCTGACGGGCAGCGAGGATTACTTCACTCATGTCCGCTGTGTTCCCGTCCCCGCTCTGGAGCTGACTCGCTGTGCGTTGGACCTGCGGGAAGGAGAAGAGGTCGCCGTCGGATACAAAGGAGTCTATTCCACTGAGCTGCTCACCCAGAGGGCCACCAGCATCATTGGAAAACACAACTCTAACAAGCCGCTCTTCCTCTACGTGGCGTTGCAGGCAGTCCATGCACCCCTGCAGGTGCCCCAGCGCTACGTGGCCCCCTACAGTTTCATCAAAGACCCCAATCGCAGGCTGTATGCCGGCATGGTGTCGGCCATGGACGAGGCAGTGGGCAACATCACTCTGGCTTTGCAGCAGGGAGGGCTTTGGGACAACACGATCCTGGTGTTCTCAACAGACAACGGAGGTCAGACGCTGACCGGTGGCAGCAACTGGCCACTGCGAGGGAGGAAGTGGTCGCTGTGGGAAGGCGGGATCCGCGGAGTCGCATTCGTCGCCAGCCCGCTACTGAAGCAACCCGGGACCGTCAGCCGCGAACTCATCCACGTCTCCGATTGGCTGCCGACACTTGTCGGCCTGGCAGGAGGGAGCACCAACGGTTCAAAGCCGCTGGACGGATTCAACGTGTGGAACACAATCAGcAAAGGGTTTGCCTCACCCAGACTGGAGCTGCTGCACAACATTGACCCTCTGTATGTTGACATCGCTCCATGTCCTGGCACCAAGCGTCAGTTAACTTTGGATCAGGTGGTCAGCGGAGCCTCCCGGGCCAACTCTGGCTTCAATGTGTCCATTCACGCCGCCATTCGATCCTCAAACTGGAAGCTGCTGACTGGCTACCCAGGCTGTGACGTTTGGTTCCCGCGGCCCGGCCACAACAGCTCCGAGTCGAGCCGCTCCAGGGTGGATCCACTGAAGTCCGTGATGCTGTTTGACATAGAAAAAGATCCAGAGGAGAGGAATGAACTATCCGCTCAGTTCCCCACAGTAGTAGACTACCTCCTCCGTAGGCTTCAGCAATACCAGAAGGGGGCCGTGCCGATAAACTTCCCCAGTGATGACCCCAGATGTGACCCAGGCCCCACTGGAGCCTGGGGACCCTGGGCTTAGATGGCAATGACGATGAGGATGAGGAtttatagattttattttttatgaccaaCTAGATTCTTTACATTTTCATCAACCAGCGGAGAAACTTAACAGTCGTTAATTGACTGACAGATGCTGCCGTTGTTATTGATCTCTGTGTCCCTGCTCTGCTTTCGGAGGTTTAGTTAAGGCGATTGAGTAAATGCTGTCAGCTACACATGTTGCTGATTTGTAAAGACTATACCTCCCTGCAGTTTCAGGTATTTGCACTTCATTTGTCTACCAGTGAGAAGCCGCAAAGctgtcaaacaaaaaaaatggctGTTTTTAAACCTGAGAGAAATATTTCAATACCAAGCAAACGATGGTGTCTTTTTGGAGCTTTTTCAATGATTGTACAGGAGAGAGCAAAATGTTAGAGGTTACCTTTTTAAACATGTGACCATCGCCAGGACAAGATTTCTGTAGGGAACTATATGTCACCAAATCACAGAGTAATGTGCAAGATAATGAGGCCACACGTGGAGagcaaaaacaaagctaaaaggagAGCGAATATTGGAGTTACGTTTGTAAAGTTGCCAGAAACGCGActgcaaatgaatgctaatggtGCTCCATATCTGCTGGATGTGCAAATAAGCAACCGTTTGCTAACAAGACCTTtttataaggtgataataggtCAATGTTGTGATGTGCGCATTGCCCCTATATAGCCAAAATGTTATATTTCaagtttaaaagcctttaaatTAAGTGTGCTCTACTTTGTTTTTGCAAAGTGCCTACTGGCAGAGGCTTAAGATGTGTTATctaatttatttcttttttttggttctggaacacaaaaaaatagcatAATAAAGTGGCCAAAATGCTGTGAAACTGTTTCCGGATGCTAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008484 sulfuric ester hydrolase activity molecular_function

KEGG:

id description
K01135 ARSB; arylsulfatase B

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU241244 lncRNA upstream 25524 27607480 ~ 27608213 (+) True G178205
TU241237 lncRNA upstream 60059 27570553 ~ 27573678 (+) True G178198
TU241193 lncRNA upstream 109589 27517476 ~ 27524148 (+) False G178166
TU241195 lncRNA upstream 111781 27516823 ~ 27521956 (+) True G178166
TU241182 lncRNA upstream 119829 27471911 ~ 27513908 (+) True G178155
TU241251 lncRNA downstream 50770 27702859 ~ 27706063 (+) True G178210
TU241305 lncRNA downstream 161394 27813483 ~ 27813878 (+) True G178256
TU241315 lncRNA downstream 280729 27932818 ~ 27933019 (+) True G178266
TU241316 lncRNA downstream 286815 27938904 ~ 27939748 (+) True G178267
TU241421 lncRNA downstream 559070 28211159 ~ 28211592 (+) True G178348
XM_039779633.1 mRNA upstream 2656 27610802 ~ 27631081 (+) True dmgdh
XM_039779681.1 mRNA upstream 65628 27539440 ~ 27568109 (+) True LOC120545398
XM_039780750.1 mRNA downstream 4447 27656536 ~ 27697932 (+) True lhfpl2a
XM_039780752.1 mRNA downstream 4447 27656536 ~ 27697932 (+) False lhfpl2a
XM_039780751.1 mRNA downstream 30610 27682699 ~ 27697932 (+) False lhfpl2a
XM_039779591.1 mRNA downstream 68108 27720197 ~ 27784006 (+) False ap3b1a
XM_039779590.1 mRNA downstream 73848 27725937 ~ 27784006 (+) True ap3b1a
TU241015 other upstream 622342 27010197 ~ 27011395 (+) False nln
XR_005636776.1 other upstream 1018778 26586647 ~ 26614959 (+) True LOC120546038
XR_005636773.1 other downstream 4447 27656536 ~ 27697932 (+) False lhfpl2a
XR_005636601.1 other downstream 928179 28580268 ~ 28588026 (+) False LOC120544907
TU241633 other downstream 1292418 28944507 ~ 28945444 (+) True G178506
TU241682 other downstream 1432860 29084949 ~ 29092326 (+) True G178529
TU242100 other downstream 2090534 29742623 ~ 29744075 (+) True G178845

Expression Profile