Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU459263 |
| length | 205 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G387465 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 15281848 ~ 15282052 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577373.1 | lncRNA | downstream | 47114 | 15220780 ~ 15234734 (-) | False | LOC117596201 |
| XR_004577374.1 | lncRNA | downstream | 47114 | 15223857 ~ 15234734 (-) | False | LOC117596201 |
| XR_004577372.1 | lncRNA | downstream | 47114 | 15230489 ~ 15234734 (-) | False | LOC117596201 |
| XR_004577371.1 | lncRNA | downstream | 47114 | 15232749 ~ 15234734 (-) | True | LOC117596201 |
| TU459229 | lncRNA | downstream | 77183 | 15198606 ~ 15204665 (-) | True | G387434 |
| TU459265 | lncRNA | upstream | 402 | 15282454 ~ 15282756 (-) | True | G387467 |
| TU459268 | lncRNA | upstream | 13395 | 15295447 ~ 15297906 (-) | True | G387469 |
| TU459291 | lncRNA | upstream | 68163 | 15350215 ~ 15357477 (-) | True | G387491 |
| TU459314 | lncRNA | upstream | 110823 | 15392875 ~ 15393084 (-) | True | G387514 |
| TU459332 | lncRNA | upstream | 123876 | 15405928 ~ 15407338 (-) | True | G387529 |
| XM_026922129.2 | mRNA | downstream | 3102 | 15266100 ~ 15278746 (-) | True | ppp2r1ba |
| XM_026921611.2 | mRNA | downstream | 63735 | 15216083 ~ 15218113 (-) | True | btg4 |
| XM_026922391.2 | mRNA | downstream | 254979 | 15018893 ~ 15026869 (-) | True | nrgna |
| XM_026922305.2 | mRNA | downstream | 270495 | 15002425 ~ 15011353 (-) | True | LOC113531526 |
| XM_026921573.2 | mRNA | downstream | 280418 | 14992398 ~ 15001430 (-) | True | ccdc15 |
| XM_026922368.2 | mRNA | upstream | 896 | 15282948 ~ 15291411 (-) | True | alg9 |
| XM_034300758.1 | mRNA | upstream | 17423 | 15299475 ~ 15305874 (-) | True | fdxacb1 |
| XM_026922286.2 | mRNA | upstream | 29033 | 15311085 ~ 15313820 (-) | True | ufc1 |
| XM_026921850.2 | mRNA | upstream | 49186 | 15331238 ~ 15339882 (-) | True | bicdl2 |
| XM_026921851.2 | mRNA | upstream | 64513 | 15346565 ~ 15349206 (-) | True | cryabb |
| TU459046 | other | downstream | 358464 | 14916662 ~ 14923384 (-) | True | ccdc84 |
| XR_003403286.1 | other | downstream | 1366351 | 13915364 ~ 13915497 (-) | True | LOC113531684 |
| XR_003403280.1 | other | downstream | 1468519 | 13813233 ~ 13813329 (-) | True | LOC113531678 |
| XR_003403212.2 | other | downstream | 3583304 | 11691234 ~ 11698544 (-) | False | LOC113531030 |
| XR_004577404.1 | other | downstream | 3654326 | 11621662 ~ 11627522 (-) | False | map1b |
| XR_003403223.2 | other | upstream | 1095533 | 16377585 ~ 16380787 (-) | False | LOC113531235 |
| trnam-cau_50 | other | upstream | 1149340 | 16431392 ~ 16431464 (-) | True | trnam-cau_50 |
| trnam-cau_51 | other | upstream | 1153146 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
| TU460427 | other | upstream | 1684236 | 16966288 ~ 16970026 (-) | False | crx |
| LOC117596251 | other | upstream | 1773531 | 17055583 ~ 17057882 (-) | True | LOC117596251 |
