Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004577374.1 |
| length | 433 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 4 |
| gene id | LOC117596201 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 15220780 ~ 15234734 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU459229 | lncRNA | downstream | 19192 | 15198606 ~ 15204665 (-) | True | G387434 |
| TU459231 | lncRNA | downstream | 19192 | 15198606 ~ 15204665 (-) | False | G387434 |
| TU459094 | lncRNA | downstream | 197010 | 15019017 ~ 15026847 (-) | False | nrgna |
| TU459030 | lncRNA | downstream | 346399 | 14870519 ~ 14877458 (-) | True | G387277 |
| TU458748 | lncRNA | downstream | 883661 | 14339316 ~ 14340196 (-) | True | G387048 |
| TU459263 | lncRNA | upstream | 47114 | 15281848 ~ 15282052 (-) | True | G387465 |
| TU459265 | lncRNA | upstream | 47720 | 15282454 ~ 15282756 (-) | True | G387467 |
| TU459268 | lncRNA | upstream | 60713 | 15295447 ~ 15297906 (-) | True | G387469 |
| TU459291 | lncRNA | upstream | 115481 | 15350215 ~ 15357477 (-) | True | G387491 |
| TU459314 | lncRNA | upstream | 158141 | 15392875 ~ 15393084 (-) | True | G387514 |
| XM_026921611.2 | mRNA | downstream | 5744 | 15216083 ~ 15218113 (-) | True | btg4 |
| XM_026922391.2 | mRNA | downstream | 196988 | 15018893 ~ 15026869 (-) | True | nrgna |
| XM_026922305.2 | mRNA | downstream | 212504 | 15002425 ~ 15011353 (-) | True | LOC113531526 |
| XM_026921573.2 | mRNA | downstream | 222427 | 14992398 ~ 15001430 (-) | True | ccdc15 |
| XM_026922426.2 | mRNA | downstream | 233079 | 14978672 ~ 14990778 (-) | True | slc37a2 |
| XM_026922129.2 | mRNA | upstream | 31366 | 15266100 ~ 15278746 (-) | True | ppp2r1ba |
| XM_026922368.2 | mRNA | upstream | 48214 | 15282948 ~ 15291411 (-) | True | alg9 |
| XM_034300758.1 | mRNA | upstream | 64741 | 15299475 ~ 15305874 (-) | True | fdxacb1 |
| XM_026922286.2 | mRNA | upstream | 76351 | 15311085 ~ 15313820 (-) | True | ufc1 |
| XM_026921850.2 | mRNA | upstream | 96504 | 15331238 ~ 15339882 (-) | True | bicdl2 |
| TU459046 | other | downstream | 300473 | 14916662 ~ 14923384 (-) | True | ccdc84 |
| XR_003403286.1 | other | downstream | 1308360 | 13915364 ~ 13915497 (-) | True | LOC113531684 |
| XR_003403280.1 | other | downstream | 1410528 | 13813233 ~ 13813329 (-) | True | LOC113531678 |
| XR_003403212.2 | other | downstream | 3525313 | 11691234 ~ 11698544 (-) | False | LOC113531030 |
| XR_004577404.1 | other | downstream | 3596335 | 11621662 ~ 11627522 (-) | False | map1b |
| XR_003403223.2 | other | upstream | 1142851 | 16377585 ~ 16380787 (-) | False | LOC113531235 |
| trnam-cau_50 | other | upstream | 1196658 | 16431392 ~ 16431464 (-) | True | trnam-cau_50 |
| trnam-cau_51 | other | upstream | 1200464 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
| TU460427 | other | upstream | 1731554 | 16966288 ~ 16970026 (-) | False | crx |
| LOC117596251 | other | upstream | 1820849 | 17055583 ~ 17057882 (-) | True | LOC117596251 |
