RNA id: AMCG00010294


Basic Information

Item Value
RNA id AMCG00010294
length 1575
RNA type mRNA
GC content 0.47
exon number 2
gene id AMCG00010294
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 23164967 ~ 23168709 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTGAAGCTGAAGCACAGGAGGCAAAGTCTCTTCCCAAATTACAAACTGGGTGTCATTACTGCACCTGTCGAAGTTGCTTGCAGAGGTGACCAAAGCGTACCCTTTGCCAAAGAGAGCAGCATGAAGCAATGGAACTCCATGCAAGAATTAAGTCGGGATATGTATGATATCTACACAGACTATGAAGACTCTGGAGATGATGAGAAGCCCATACCACCCTTCTCAAAGCTCAGCTCACCTGTGAAGAACTACATGCTTAACATCAACGTCGGTGGCAAGACGTACAAGATAGCTTACCGAGTGGCTGCTAAGTATCCAAAGACCAGGATAGGTAGGCTGGCTACCTACACAGATCACAACAGGAAACTAGACCTTTGCGATGACTACGTCGTTCAGAACAATGAGTATTTCTTCGACCGCGATCCTGACATTTTCCAccatgtgtttaatttttacaGGACTGGAGTGCTCTGGATAAAAGATGAACTGTGCCCCCGAAACTTCCTGGAAGAGATCAACTACTGGGGGGTGAGGATTaagaacacacacagatgtTGCCGCATCTCGTTTGAGGAGCGGCAGGACGAGCTCAACGAGCAACTCAAAGTACAGAGGGAACTTCAGGCAGAAGTCGAGATGGAGGAAAACATGGAGCTCTTCCGAGACATGGCGTTAGGTCATCTCAGGAGACGCATATGGAACCTAATGGAGAAACCCTTTTCTTCGATCACTGCAAAGTTGATGGCTGTGGCCTCCAGCTTTTTCGTCTTGGTTTCTCTCGTTGCCATGACATTAAACACAGTAGAGGAAATGCAATACAAGACCCACACGGGGCAGTTGAGTGGCAAAAGCTATATGGAGTATATGGAGACTTTCTGCATAGCCTTCTTCACTATAGAGTACCTGCTGAGGCTGGTGTCCACCCCAGACTTGTTACGGTTCACAAAGAGTGTTTTGAACGCTGTGGACTTAATTGCCATCCTCCCTTTTTACCTGCAGATTTTGCTGGAATGCTTCATAAGTGAGGACTATGGGAAGCATGACATCGAGACGGTGGGGAGGGTGGGAAAAGTTGGCCAAAGCTTGAGAATCATGAGGCTTATGAGGATCTTCAGGATTTTGAAGTTGGCAAGGCATTCCACAGGTCTGAGAGCTTTTGGTTTCACTTTAAGACAGTGCTACCAACAAGTGGGATGTCTCTTCCTCTTCATTGCCATGGGGATCTTTACCTTCTCTGCCATGGTCTATTCTGTGGAGCATGATGTTCATGAGACCAACTTCACCAGCATCCCACACTCGTGGTGGTGGGCCGCTGTGAGCATTTCTACAGTCGGCTATGGAGACATGTTTCCAGAGACGCACCTTGGCCGGCTCTTTGCATTTGCCTGCATCTCCTTCGGGATCATCCTCAACGGAATGCCAATCTCCATTCTGTACAACAAATTCTCAGACTACTACACAAAGCTGAAGGCTCATGAATACACCTCCAGTCTAAAGAACAGAGGAAAGATCAAATTTAAAGAAAGAGCCACCAGAAAGATCACCGAATGCTGTGGGGAACAAGACCAATAA

Function

GO: NA

KEGG:

id description
K04935 KCNV2, KV8.2; potassium channel subfamily V member 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99207 lncRNA downstream 17898 23141385 ~ 23147069 (-) True G79548
TU99206 lncRNA downstream 19912 23141385 ~ 23145055 (-) False G79548
TU99200 lncRNA downstream 55875 23108853 ~ 23109092 (-) True G79542
TU99199 lncRNA downstream 67659 23096602 ~ 23097308 (-) True G79541
TU99134 lncRNA downstream 429527 22734995 ~ 22735440 (-) True G79483
TU99264 lncRNA upstream 158279 23326988 ~ 23327361 (-) True G79594
TU99265 lncRNA upstream 158789 23327498 ~ 23328969 (-) False G79595
TU99266 lncRNA upstream 158789 23327498 ~ 23331515 (-) True G79595
TU99330 lncRNA upstream 293053 23461762 ~ 23466211 (-) True G79648
TU99331 lncRNA upstream 293053 23461762 ~ 23466211 (-) False G79648
AMCG00010289 mRNA downstream 59001 23104860 ~ 23105966 (-) True AMCG00010289
AMCG00010288 mRNA downstream 78622 23082655 ~ 23086345 (-) True AMCG00010288
AMCG00010285 mRNA downstream 117526 23044054 ~ 23047441 (-) True AMCG00010285
AMCG00010284 mRNA downstream 159521 23003015 ~ 23005446 (-) True AMCG00010284
AMCG00010286 mRNA downstream 168526 22987407 ~ 22996441 (-) True AMCG00010286
AMCG00010296 mRNA upstream 7065 23175774 ~ 23201168 (-) True AMCG00010296
AMCG00010295 mRNA upstream 44571 23213280 ~ 23229997 (-) True AMCG00010295
AMCG00010303 mRNA upstream 209651 23378360 ~ 23385105 (-) True AMCG00010303
AMCG00010308 mRNA upstream 230642 23399351 ~ 23416520 (-) True AMCG00010308
AMCG00010304 mRNA upstream 259049 23427758 ~ 23443515 (-) True AMCG00010304
TU99198 other downstream 78982 23082846 ~ 23085985 (-) False AMCG00010288
TU98958 other downstream 1182993 21964529 ~ 21981974 (-) True AMCG00010271
TU98765 other downstream 2083142 21075941 ~ 21081825 (-) False AMCG00010247
TU98705 other downstream 2223574 20931171 ~ 20941393 (-) True G79147
TU98072 other downstream 5219206 17945235 ~ 17945761 (-) True G78610
TU99273 other upstream 190934 23359643 ~ 23364947 (-) True G79601
TU99963 other upstream 3204033 26372742 ~ 26379747 (-) True AMCG00010364
TU101107 other upstream 8785675 31954384 ~ 31971755 (-) True AMCG00010487
TU101338 other upstream 9826741 32995450 ~ 32999999 (-) False AMCG00010509
TU101930 other upstream 12546242 35714951 ~ 35716672 (-) True G81716

Expression Profile