G214601


Basic Information

Item Value
gene id G214601
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3869280 ~ 3869506 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU243497
CATGTGCTCATTCATGGCTGTATTATTTAATTCATGCAAAGTTACATCTTTATTGGGACAGGACTTGACGGATTATCCTACGTGACTCTGTGAGCTTGTCTCTATTTCTTAGAGACAAGCTGCATAAACTAGCTACATTTCAGGCATTTATGTAACACATCTAATTTGTGCATTAATGGCTGTTATGTTAAATAAATTTTACTAATTACAGCAAAGCAGGTAAGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243497 True 227 lncRNA 0.34 1 3869280 3869506

Neighbor

gene id symbol gene type direction distance location
CI01000050_03814516_03818892 NA coding upstream 50341 3813420 ~ 3818939 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 coding upstream 60410 3805143 ~ 3808870 (+)
CI01000050_03679119_03683710 NA coding upstream 185111 3679080 ~ 3684169 (+)
CI01000050_03641769_03645039 NA coding upstream 224171 3639187 ~ 3645109 (+)
CI01000050_03599274_03618237 SLC25A37 coding upstream 250240 3599274 ~ 3619040 (+)
CI01000050_03938328_03956122 RHOBTB2 coding downstream 68822 3931890 ~ 3957044 (+)
CI01000050_03989489_04121180 NA coding downstream 118751 3988257 ~ 4121393 (+)
CI01000050_04122649_04127014 EGR3 coding downstream 253143 4122649 ~ 4127045 (+)
CI01000050_04159232_04161131 NA coding downstream 289505 4159011 ~ 4161131 (+)
CI01000050_04190820_04204792 BIN3 coding downstream 321314 4190820 ~ 4205923 (+)
G214567 NA non-coding upstream 25554 3843380 ~ 3843726 (+)
G214506 NA non-coding upstream 106757 3758375 ~ 3762523 (+)
G214503 NA non-coding upstream 116012 3753042 ~ 3753268 (+)
G214501 NA non-coding upstream 130738 3738191 ~ 3738542 (+)
G214605 NA non-coding downstream 3649 3873155 ~ 3903728 (+)
G214632 NA non-coding downstream 35269 3904775 ~ 3905081 (+)
G214575 NA non-coding downstream 37603 3907109 ~ 3961365 (+)
G214571 NA non-coding downstream 43291 3912797 ~ 3917161 (+)
CI01000050_02852118_02864754 RNF122 other upstream 1003458 2852118 ~ 2865822 (+)
G212927 NA other upstream 1094147 2774839 ~ 2775133 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 2171872 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 2569674 1296365 ~ 1298255 (+)
G214717 NA other downstream 238076 4107582 ~ 4108280 (+)
CI01000050_04591548_04592778 NA other downstream 722049 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 1538079 5407585 ~ 5409417 (+)
G215539 NA other downstream 1760104 5629610 ~ 5631203 (+)

Expression


Co-expression Network