Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00043229 |
| length | 967 |
| RNA type | processed_transcript |
| GC content | 0.43 |
| exon number | 2 |
| gene id | XLOC_021797 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 31933583 ~ 31940912 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ZDB-GENE-030131-9862 | Is expressed in yolk syncytial layer. Orthologous to human C1orf115 (chromosome 1 open reading frame 115). |
| ensembl_id | ENSDART00000132981 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00044851 | lncRNA | upstream | 47762 | 31863739 ~ 31885913 (+) | True | XLOC_021795 |
| TCONS_00043214 | lncRNA | upstream | 684730 | 31245431 ~ 31248945 (+) | False | XLOC_021787 |
| TCONS_00043215 | lncRNA | upstream | 684885 | 31245792 ~ 31248790 (+) | True | XLOC_021787 |
| TCONS_00044850 | lncRNA | upstream | 847724 | 31078564 ~ 31085951 (+) | True | XLOC_021785 |
| TCONS_00043203 | lncRNA | upstream | 1160789 | 30764287 ~ 30772886 (+) | True | XLOC_021777 |
| TCONS_00043238 | lncRNA | downstream | 87751 | 32028625 ~ 32038219 (+) | False | XLOC_021802 |
| TCONS_00043241 | lncRNA | downstream | 93867 | 32034741 ~ 32038219 (+) | False | XLOC_021802 |
| TCONS_00043242 | lncRNA | downstream | 96213 | 32037087 ~ 32038060 (+) | False | XLOC_021802 |
| TCONS_00043249 | lncRNA | downstream | 253534 | 32194408 ~ 32201494 (+) | True | XLOC_021805 |
| TCONS_00044852 | lncRNA | downstream | 269384 | 32210258 ~ 32213360 (+) | True | XLOC_021806 |
| TCONS_00043227 | mRNA | upstream | 14520 | 31913292 ~ 31919155 (+) | True | XLOC_021796 |
| TCONS_00043226 | mRNA | upstream | 18679 | 31912882 ~ 31914996 (+) | False | XLOC_021796 |
| TCONS_00043224 | mRNA | upstream | 103632 | 31815423 ~ 31830043 (+) | False | XLOC_021794 |
| TCONS_00043225 | mRNA | upstream | 104642 | 31815492 ~ 31829033 (+) | True | XLOC_021794 |
| TCONS_00043221 | mRNA | upstream | 328083 | 31596194 ~ 31605592 (+) | False | XLOC_021792 |
| TCONS_00043230 | mRNA | downstream | 1166 | 31942040 ~ 31953643 (+) | True | XLOC_021798 |
| TCONS_00043231 | mRNA | downstream | 38728 | 31979602 ~ 32007818 (+) | False | XLOC_021799 |
| TCONS_00043232 | mRNA | downstream | 40922 | 31981796 ~ 32007370 (+) | True | XLOC_021799 |
| TCONS_00043233 | mRNA | downstream | 70894 | 32011768 ~ 32020198 (+) | True | XLOC_021800 |
| TCONS_00043234 | mRNA | downstream | 80929 | 32021803 ~ 32027198 (+) | True | XLOC_021801 |
| TCONS_00043223 | other | upstream | 266132 | 31667429 ~ 31667543 (+) | True | XLOC_021793 |
| TCONS_00043220 | other | upstream | 500012 | 31433579 ~ 31433663 (+) | True | XLOC_021791 |
| TCONS_00043219 | other | upstream | 500327 | 31433273 ~ 31433348 (+) | True | XLOC_021790 |
| TCONS_00043209 | other | upstream | 954176 | 30979385 ~ 30979499 (+) | True | XLOC_021782 |
| TCONS_00043184 | other | upstream | 2345117 | 29588444 ~ 29588558 (+) | True | XLOC_021766 |
| TCONS_00043240 | other | downstream | 91891 | 32032765 ~ 32038219 (+) | False | XLOC_021802 |
| TCONS_00043247 | other | downstream | 160337 | 32101211 ~ 32107481 (+) | False | XLOC_021804 |
| TCONS_00043259 | other | downstream | 466321 | 32407195 ~ 32409927 (+) | True | XLOC_021810 |
| TCONS_00043260 | other | downstream | 471660 | 32412534 ~ 32421750 (+) | True | XLOC_021809 |
| TCONS_00043264 | other | downstream | 1178136 | 33119010 ~ 33119124 (+) | True | XLOC_021816 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000001_13235608_13240350.mRNA | True | 412 | mRNA | 0.50 | 2 | CI01000001 | 13235608 ~ 13240441 (+) |
