Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00043238 |
| length | 1099 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 8 |
| gene id | XLOC_021802 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 32028574 ~ 32060885 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0090307 | mitotic spindle assembly | biological_process |
| GO:0032147 | activation of protein kinase activity | biological_process |
| GO:0060236 | regulation of mitotic spindle organization | biological_process |
| GO:0072686 | mitotic spindle | cellular_component |
| GO:0005819 | spindle | cellular_component |
| GO:0005874 | microtubule | cellular_component |
| GO:0005880 | nuclear microtubule | cellular_component |
| GO:0008017 | microtubule binding | molecular_function |
| GO:0030295 | protein kinase activator activity | molecular_function |
| id | description |
|---|---|
| ko03036 | Chromosome and associated proteins |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00044851 | lncRNA | upstream | 142712 | 31863739 ~ 31885913 (+) | True | XLOC_021795 |
| TCONS_00043214 | lncRNA | upstream | 779680 | 31245431 ~ 31248945 (+) | False | XLOC_021787 |
| TCONS_00043215 | lncRNA | upstream | 779835 | 31245792 ~ 31248790 (+) | True | XLOC_021787 |
| TCONS_00044850 | lncRNA | upstream | 942674 | 31078564 ~ 31085951 (+) | True | XLOC_021785 |
| TCONS_00043203 | lncRNA | upstream | 1255739 | 30764287 ~ 30772886 (+) | True | XLOC_021777 |
| TCONS_00043249 | lncRNA | downstream | 156189 | 32194408 ~ 32201494 (+) | True | XLOC_021805 |
| TCONS_00044852 | lncRNA | downstream | 172039 | 32210258 ~ 32213360 (+) | True | XLOC_021806 |
| TCONS_00044853 | lncRNA | downstream | 212137 | 32250356 ~ 32253077 (+) | True | XLOC_021807 |
| TCONS_00044854 | lncRNA | downstream | 354274 | 32392493 ~ 32418824 (+) | False | XLOC_021809 |
| TCONS_00043252 | lncRNA | downstream | 354301 | 32392520 ~ 32397844 (+) | False | XLOC_021809 |
| TCONS_00043234 | mRNA | upstream | 1427 | 32021803 ~ 32027198 (+) | True | XLOC_021801 |
| TCONS_00043233 | mRNA | upstream | 8427 | 32011768 ~ 32020198 (+) | True | XLOC_021800 |
| TCONS_00043231 | mRNA | upstream | 20807 | 31979602 ~ 32007818 (+) | False | XLOC_021799 |
| TCONS_00043232 | mRNA | upstream | 21255 | 31981796 ~ 32007370 (+) | True | XLOC_021799 |
| TCONS_00043230 | mRNA | upstream | 74982 | 31942040 ~ 31953643 (+) | True | XLOC_021798 |
| TCONS_00043243 | mRNA | downstream | 1167 | 32039386 ~ 32060883 (+) | False | XLOC_021802 |
| TCONS_00043244 | mRNA | downstream | 6191 | 32044410 ~ 32060885 (+) | True | XLOC_021802 |
| TCONS_00043245 | mRNA | downstream | 27949 | 32066168 ~ 32085939 (+) | True | XLOC_021803 |
| TCONS_00043246 | mRNA | downstream | 62983 | 32101202 ~ 32107459 (+) | False | XLOC_021804 |
| TCONS_00043248 | mRNA | downstream | 63142 | 32101361 ~ 32107608 (+) | True | XLOC_021804 |
| TCONS_00043229 | other | upstream | 87751 | 31933675 ~ 31940874 (+) | True | XLOC_021797 |
| TCONS_00043223 | other | upstream | 361082 | 31667429 ~ 31667543 (+) | True | XLOC_021793 |
| TCONS_00043220 | other | upstream | 594962 | 31433579 ~ 31433663 (+) | True | XLOC_021791 |
| TCONS_00043219 | other | upstream | 595277 | 31433273 ~ 31433348 (+) | True | XLOC_021790 |
| TCONS_00043209 | other | upstream | 1049126 | 30979385 ~ 30979499 (+) | True | XLOC_021782 |
| TCONS_00043247 | other | downstream | 62992 | 32101211 ~ 32107481 (+) | False | XLOC_021804 |
| TCONS_00043259 | other | downstream | 368976 | 32407195 ~ 32409927 (+) | True | XLOC_021810 |
| TCONS_00043260 | other | downstream | 374315 | 32412534 ~ 32421750 (+) | True | XLOC_021809 |
| TCONS_00043264 | other | downstream | 1080791 | 33119010 ~ 33119124 (+) | True | XLOC_021816 |
| TCONS_00043265 | other | downstream | 1252054 | 33290273 ~ 33290361 (+) | True | XLOC_021817 |
