RNA id: TCONS_00004329


Basic Information

Item Value
RNA id TCONS_00004329
length 10818
RNA type mRNA
GC content 0.51
exon number 59
gene id XLOC_002265
representative False

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 34426256 ~ 34734995 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CGCTCCCGCAGACAGGGGGCGTCAATATGGCGTCCTGAGAAAGACAACACAGCCCGACGCCGCACCGATCTTCGGCTGACATCGGGAGGAGAGAGGGACCGTGTAGACGTGATTTCGTCCTGTGCATCCCTCTGAACGGCTGCAAGCATCGGCTTTGGATGTGCAGGTCtcggaggaagaggaggaggacagCCTTTGACACCTGACCGAGAATTTTCCGTTTTCATCTGTATTTGATGCTGCTGCTCAGCGCTCGGTGATACAAAAGCAGGTGAGACCGAGGCGACCGCTCCTTTTTTGGGATTCGGGTCGGAAATGTCGAGCGAGAGACCGGTTTTAGCACCGGGTTCCGCCTCGCTCACGGACCGAGAAGCCCCACCAGCAGCAGCACCACCGGGTTCGGGGCAGCAAGTCGTAACGGGCTCTGTTACCGGGGACATGATGGTGTCTGGATCGGGCGCCGTGGTTCTACCGGCCGGGGTGATAAACCCCTCGGTTCCGATCCGGAATATCAAGATGAAATTCGCAGTGCTCATCGGTTTGATCCAGGTCGGGGAGGTTAGCAACAGAGACATCGTGGAGACCGTTTTAAATCTGCTGGTGGGTGGAGAGTTTGACCTGGAAATGAACTTCATCATCCAGGATGCAGAGAGCATCGCCTGCATGGTGGAGCTGCTGGAGCACTGTGACGTGACCTGCCAGGCGGAGATCTGGAGCATGTTCACCGCCATCCTGCGCAAGAGCGTCCGCAACCTGCAGACCAGCACGGAGGTGGGCCTCATCCAGCAGGTGCTGCAGAAGATGAGCGCTGTAGATGACATGATTGCAGATCTCCTAGTGGACATGCTGGGGGTTTTGGCCAGCTATAGCATCACAGTGAAGGAGCTGAAGCTGTTGTTCAGCATGCTGAGGGGCGACGCAGGCGTCTGGCCAAGACACGCTATTAAGCTGCTGTCAGTGCTGAATCAGATGCCTCAGCGTCATGGTCCTGACACCTTTTTCAACTTCCCAGGACGCAGTGCGGCGGCCATCGCTTTGCCGCCTATTGCTAAGTGGCCTTATCAGAATGGATTCACTCTCAACACTTGGTTCCGAATGGACCCACTCAATAATATCAATGTAGACAAGGACAAACCATACTTATACTGTTTTCGAACCAGTAAAGGCATTGGCTACTCAGCGCACTTTGTGGGGAACTGTTTAATCGTGACATCACTGAAGTCAAAGGGGAAAGGCTTTCAACACTGTGTGAAGTACGACTTCCAGCCCAGGAAGTGGTACATGATCAGCATCGTCCACATCTACAACCGTTGGAGGAATAGCGAGATCCGATGCTACGTCAATGGCCAGCTGGTTTCGTATGGAGACATGGCCTGGCACGTCAACACCAACGATAGTTATGATAAATGTTTCCTGGGCTCGTCAGAGACTGCGGATGCTAACCGTGTGTTTTGTGGGCAACTCGGAGCTGTGTACGTTTTCAGCGAGGCACTGAACCCCGCACAGATCTTTGCCATTCATCAACTCGGACCGGGATATAAGAGCACGTTTAAGTTCAAGTCAGAAAGCGACATCCACCTGGCTGAGCACCATAAGCAGGTTCTGTATGATGGCAAGTTGGCCAGCAGCATCTCCTTCACCTACAATGCTAAAGCCACCGACGCGCAGCTCTGTCTGGAGTCCTCGCCCAGAGAAAACGCCTCCATATTTGTGCACTCGCCACACGCCCTCATGCTCCAGgatgtCAAGGCCATCGTCACTCACTCCATCCACAGCGCCATCCACTCTATTGGAGGAATCCAGGTCCTCTTCCCGCTCTTCTCACAGCTGGACTACAGGCAACCCAACGACAGCCCTGTGGAGACGACCGTCTGTGCAACTCTCCTTGCATTCTTAGTGGAGTTGTTGAAGAGTTCAGTAGCCATGCAGGAGCAGATGTTGGGCGGGAAAGGCTTTCTGGTCATTGGTTATTTGCTGGAAAAGtCTTCTCGGGTTCACATCACCAGGGCAGTTTTGGAGCAGTTTCTGTCTTTTGCCAAGTATCTCGATGGTTTGACTCACGGAGCTCCTTTACTGAAGCAGCTCTGCGACCACGTGCTGTTTAACGCTGCCATCTGGATCCACACACCAGCTAAGGTTCAGCTGTCCCTCTACACGTACCTGTCGGCAGAATTCATTGGCACCGCAACCATCTACAGCACCATCCGGAGAGTGGGCACCGTCCTGCAGCTCATGCACACACTCAAGTACTACTACTGGGCCAGCAACCCCCTGGAAAGCAGCGGGATCACCCCCAAAGGCCTGGACGGTCCACGACCCTCTCAGAAGGAGATTATATCCCTGCGGGCGTTCATGCTGCTTTTCCTCAAACAACTCATTCTCAAGgACCGAGGAGTGAAGGAAGATGAGTTGCAGAGCATATTAAACTACCTGCTAACCATGCATGAGgatgaaaacatccacgaTGTGCTCCAGCTTTTGGTGGCGCTCATGTCTGAACACCCAGCCTCCATGATCCCGGCCTTCGATCAGAGGAACGGGATACGAGTCATCTACAAGCTTCTGGCCTCCAAAAGTGAGAGCATACGAGTCCAAGCTCTGAAAGTCCTCGGCTACTTCCTGAAACATCTGGGACACAAgaggAAGGTGGagatcatgcacacacacagtctcttCACGTTACTGGGAGAGCGGTTAATGATGCACACCAGCACTGTGACCATCACCACCTACAACACACTCTATGAGATCTTAACAGAACAAGTTTGCACTCAGGTGGTGCACAAGCCGCATCCAGAACCCGATTCCACAGTCAAGATCCAAAACCCCATGATTTTGAAGGTTGTGGCGACGTTGCTTAAAAGCTCCTCTCCCAGTGCTGAGCTGATGGAAGTACGGCGTCTCTTCCTGTCCGACATGATCAAACTCTTTAGCAACAGCCGAGAGAACAGACGgtgtctGCTGCAGTGTTCGGTGTGGCAGGACTGGATGTTCTCTCTGGGCTACATTAACCCAAAGAACCCGGAGGAGCAGAAGATCACCGAAATGGTCTACAACATATTCCGTATCCTGCTCTACCACGCCATCAAGTACGAGTGGGGAGGCTGGCGCGTGTGGGTGGACACACTCTCCATCGCCCACTCCAAGGTGACCTACGAGGCGCATAAGGAGTACCTGGCAAAGATGTATGAGGAATATCAACGGCAAGAAGAGGAGAACATCAAGAAGGGGAAAAAAGGCTCCGTCAGCACAATATCCGGCCTGTCTGCTCAACCCACCTCAGTCAATGGAAACCTGGAGATCCGCGAGATTGACGACACATCTCAGACACAGACACCAGAGAGCGAAGTGGACTACGGAGAGAACGCAGACTCTCGAATCCTACTAGCTGAAGCCAAAGTTCCAGAAAGCGAAGCCGAAAGTTCAGCTGCAGGGGTTCGTGTAGAAGTCCACGACCTGCTGGTGGACATAAAAGCAGAGAAGGTGGAGGCCACTGAGGTTAAATTAGATGATCTGGATCTGTCCCCGGAGGTActcggaggaggaggagggatgGAGAACGGCCCCCTGGTGGAAGTAGACTCTCTTTTAGACAGCGCCTACTGTGCTGCAGTTCACAAGCTCAACGGGAGCCTTGTCCCCAAAGAGGAGGAAAGTGTCGTGGTGGGTTTGACTGAAGATGACGGGAACATGGGTCCTCTAATAACCCTTGCAGATGAGAAGGACAGTGTTCCCAGCAACAATGGCTTCCTGTTCCCAAAGGTGGATGAGAAGCTGCTTCCCTCGTTGGCGTCGACGGAGCCTCTGGTGCTGCCCAGTCCCGATCAACCCCCTTGCTCTACAACGCCACACACTTCAAGTGCCAGTGACGATCTCAGTCTGCTGGCCCACATGACATCTTGTGGTTCAGACCTGGTGCAAACCCCAAGTGGCCTAGAGGATGATGGGTTTAAGTTGCAGAGCTCCTTGGCAGACATCAGCACGCTGGCAGAGGCTGAGGCTCAAGCTGCGGCCCGGACAGCAGAGTGCTTAGAGCAGGAGTCTGGGGACGCCAGGGCTGGAAAGAGCTCAGGGGACGCAGCCAGCACCACTTCAGACACCGAGAGATCTGATGATGGAAAAGACAAAGAAATGAAGAAGATTCAGACCACGGCCACCACACAGGCTCTTCATGGACGTATGTCAGGTCAGATGGAGAGGGACCTGCGTGTGGATCTGGGTTTCCGGGGAATGCCTATGACTGAAGAACAGCGGCGGCAGTTCAGCCCAGGCCCTCGCACTACCATGTTCCGTATCCCAGAATTTAAGTGGTCACCCATGCACCAGCGCCTTCTCACGGACTTATTATTCGCCCTGGAAAGCGATGTACACATGTGGAGGAGCCACTCGACGAAATCAGTCATGGACTTCGTAAACAGTAACGAGAACATTATATTTGTCCACAACACCATCCACCTCATTTCTCAGATGGTTGATAACATCATTATTGCCTGTGGTGGGATCCTGCCGTTGCTCTCTGCTGCCACCTCGCCATCTAGTTCTAAGGTTAGCGCAAACCCTACGCAAGGAAGTTCTTGCTTACAGAAGGGCGCAAAAAGCAGTGAAGTTAATAGCCTGCCAGGAAGCTCTGGCACAGGGGTAGAGACGGAGCTTGAGAATGTGGAGGCGACTCAAGGCATGTCATCAGAGACGGCGGTCACGTTTCTCAGCAGACTGATGGCCATGGTGGACGTGTTGGTGTTTGCCAGTTCTCTGAACTTCAGCGAGATTGAGGCTGAGAAGAACATGTCTTCAGGTGGACTGATGCGCCAGTGCCTGCGATTAGTGTGTTGTGTAGCAGTGAGGAACTGTCTGGAGTGCAGGCAAAGGCAGAGAGACCGAGGCAGTAAAACCTCTCTGCCAATCAGCAAAACCCAGGAGAACCTCCAGACCGCAGCGTCCGCCAGCaagACTGTCATCCAGAATGTCCCGCGTAACCTTTCCCCCATCAAAGACCCAGACCGTCTGCTGCAGGACGTGGACATCAATCGTCTGCGGGCCGTCGTCTTCAGAGACGTGGATGACAGTAAACAGGCTCAGTTTCTGGCTCTGGCTGTCGTTTACTTCATCTCTGTCCTGATGGTGTCCAAATACCGGGACATCCTGGAGCCGCAGCGGGAGATCGGCCGATCCAGCAGCCTATCAGGGAGAAGCATCCGACAGGAGATTAATTCGCCCACCAGCACAGAAAACCCATCGTTGTTCTCGGACGGTGTTCGTGGAGAGCGTCAAGCCATGACCCCTCTGGAGGATCTGCCTCTGGAAGCCTCGCTGCCCCACACAGACTCTGGGATTGGGGAGGAGCAGGTCACCGGGGCCCTGAATGGCTCCGATTTGGGCACAGACCACCACAGCGGCCTGGTGGGTGGCTCCGGAGGGCCCGACGCCATGAGCGAACTCCTCTGCACGCTGTCGTCTGAGGTGCGCAAGTCCAGCGAGTCCCTGCTGGAGTCTCCTCTTGGAGTGGAGGTGCTTAAACCGGCTGCCTCCATCTCCAGCATCAGCCAGGCTAACAAGGGCATCAATGTAAAGGAGATCCTGAAGAGTCTGGTGGCGGCACCGGTGGAGGGAGCAGAGGCGGGACCCGAACCACAGCCGTACCACCCGGACCCCGCTCTCAAGAGGGAAGCGGCGGCCATGCTGCCCATGCAGTTCCACTCGTTTGACAGGAGTGTGGTGGTGCCCGTGAAGAAGCCTCCTCCAGGAAGCCTGGCAGTGAATACAGTAGGTACCCCGACCAGCGGTGCAGTGCCCTCTTCAGGAAGCACACCCAACATCTTCGCTGCCGCTACAGCAACACCTAAAAGTATGATCAATACAACAGGTGCCACAGACTCTGCCtcttcttcatcctcctcctcctcaagcTTTGTGAACGGTGCCACAAGTAAAAACCTCCCCGCGGTTCAGACAGTTGCGCCCATGCCTGAAGATACAGTGGAAAACATgagTGCCTTTTGTGAAGTGGACCAGTGTCCACTGCGAACCAGGCTGACGCCTCCTGAACTCAAATCCTTTAGCTCGCTGACAGGATTCCAAACAGCCCCCAGAGATGCAGGACAGTTTCTTAGTATCACCACTAAGCTGGAGCGGGCGCTGGAGAAAGTGGCTCCACTGCTGAGGGAGATCTTTGTGGACTTTGCGCCGTTCCTGTCGCGGACGCTGCTGGGCAGTCATGGGCAGGAGCTGCTCATTGAAGGTACAGGTTTAGTTTGTATGAAGTCCAGTACGTCAGTAGTGGAGCTTGTGATGCTGTTGTGCTCACAGGAGTGGCAGAACTCCATACAAAAGAATGCAGGACTTGCATTCATCGAGCTTATTAATGAAGGACGGCTTCTGTGTCATGCCATGAAGGATCACATTGTCCGTGTTGCCAATGAGGCAGAGTTTATCCTCAACAGGCAGAGAGCTGAAGATGTCCACAAACATGCTGAATTTGAGTCCAATTGTGCCCAGTACGCTGCTGACAGGAGGGAAGAGGAGAAGATGTGTGATCACCTGATCAGTGCAGCCAAACACAGAGATCACGTCACTGCAAACCAGCTGAAACAGAAGATCCTAAACATTCTGACAAATAAGCATGGCGCGTGGGGAACCATGTCACAGAGTCAGTTGCATGATTTCTGGCGTTTGGATTACTGGGAGGACGACTTGCGCAGGAGGCGGAGATTCGTCCGCAATGCCTTTGGCTCCacccacacagacgtgactctcAAATCCCTTGAAGAATACGGCCCTGAGGAAGAAGAGGGCATGAAGTCAAAGAAGTCGTTCCGCAGTCATTCGGTGGTCAGTCAGAATCCAGAGACAGAGCTGATGCTGGAGGGAGACGATGATGCCGTCAGTCTGCTGCAGGAGAAAGAGATCGACAACCTTGCAGGTCCTGTGGTTTTGAGCACTCCGGCTCAGCTGGTTGCTCCTGTGATTGTGGCTAGAGGGACGTTGTCCATCACCACAACTGAAATCTATTTCGAGGTGGACGAGGATGATCCGACTTTCAAAAAGATCGATGCAAAGGTATTGGGGTATACTGAAGGTCTGCATGGGAAATGGATGTTCAGTGAGATCAGAGCAGTTTTTTCCAGACGTTACCTGCTCCAGAATACTGGATTAGAGGTCTTCATGGCCAACAGAACATCCGTCATGTTCAACTTCCCAGATCAGGCCACCGTGAAGAAAGTAGTGTACAGTTTACCTCGGGTCGGCGTCGGAACCAGCTATGGCCTTCCACAGGCGAGACGTATTTCTCTGGCCACACCGAGACAACTCTTTAAATCCTCTAATATGACTCAGCGATGGCAGCGGAGGGAGATTTCTAATTTCGAGTACCTCATGTTCCTCAACACGATTGCAGGGAGGACTTATAATGATCTGAACCAGTATCCCGTCTTCCCCTGGGTTCTGACCAATTATGAGTCCGAGGATCTGGATCTCACCCTGCCTGGGAATTTCCGGGATCTCTCAAAGCCAATCGGAGCCCTGAACCCGAAGCGAGCTGTGTTTTACGCTGAGCGCTATGAGACGTGGGAGGACGATGGCGCTGCGCCTCATCATTACTCCTCGCTCTACTCCACCGCCGCCTCCACGCTCTACTGGCTCGTCAGGATAGAACCCTTCACCACCTTTTTCTTGAATTGTAACGAAAACAAGTTTGATCATCCTGACCGGACGTTTTCTGGGATCGCCCGCTCCTGGCGAAGCTGTCAGAGGGACACGTCTGATGTGAGGGAGCTGATCCCTGAGTTCTACTACCTCCCGGAGATGTTTGTGAACAGCAGTGGGTATGACCTGGGTGTGAGGGAGGACAGGACTGCTGTGTGTGACGTGGAGCTCCCCGTCTGGGCCAAAAAACCTGAAGACTTTGTCCGCATCAATAGAATGGCGCTGGAGAGTGAGTTTGTGTCCTGTCAGCTGCACCAGTGGATCGATCTGATCTTCGGCTATAAGCAGAGAGGACCCGAGGCCGTCAGAGCACTCAACGTTTTCCATTATCTGTCTTACGAGGGCTCCATCAACCTGGACACCATCACTGACCCTCAGCTCAGAGAGTCTATGGAGGCTCAGATTCAGTCATTTGGCCAGGCTCCATCACAGCTGCTCATCGAGCCTCATCCTCCACGCAGCTCCGCCATGCACCTGTGTTTCCTTCCTCAGAGTCCGCTGATGTTCAAGGATCAGATGCAGCAGGACGTGATCATGGTGCTCAAGTTTCCCTCCAACTCTCCAGTCACACACGTGGCAGCAAACACACTTCCACACCTCAGCATCCCTGCGGCGGTCACAGTCACGTGCAGCCGCTTATTCGCCGTCAACCGATGGCACAACACTGTCGGTCTCAGAGGAGCTCCGGGATATTCACTAGAACAGGCTCATCACCTCCCCATTGAGATGGACTCTCTGATTGCCAATAACTCTGGCATCAGCAAACGGCAGATCACAGACTTGGTGGATCAGAGCATTCAGATCAACACACACTGCTTTGTGGTGACAGCCGACAACCGCTACATCCTGGCCTgtggtttctgggacaagagctTCCGTGTTTACTCCACTGAAACAGGGAAACTGACACAGATTGTGTTCGGCCACTGGGATGTGGTGACGTGTCTTGCGAGATCAGAGTCCTACATCGGTGGCGATTGTTACATCGTGTCCGGTTCACGAGATGCAACTCTTCTTCTGTGGTACTGGAGTGGACGGCACCACATCATTGGAGACAATCCCAACAACAGTGATTATCCGGCACCGCGAGCGGTTCTGACAGGCCATGATCATGAGGtggtgtgtgtgtcagtgtgtgctgAACTCGGCCTGGTCATCAGTGGAGCCAAAGAGGGCCCGTGTTTGGTGCACACCATCACAGGGGATTTACTGCGGGCTCTGGAGGGTCCCGAGAACTGCCTGCGGCCCCGTCTGATCTCAGTGTCCAGCGAGGGCCACTGTATCATCTACTATGAGAGAGGACAATTCTGCAACTTCAGCATTAATGGAAAACTGCTGGCTCAGATGGAGATCAACGACTCCACACGTGCAATTCTGCTGAGCAGTGACGGTCAGAATCTGGTGACTGGAGGTGATAACGGTGTTGTGGAGGTCTGGCAGGCCTGTGACTTTAAGCAGCTCTATATTTACCCCGGCTGTGATGCAGGCATCAGGGCAATGGACCTGTCACATGACCAGAGGACTTTAATCACTGGGATGGCGTCGGGCAGCATTGTGGCGTTCAACATCGACTTCAACCGATGGCACTACGAGCACCAGAACAGATACTGAGACCGAACAAAACAGCAGAAAGATGAGCTTCATTTCCTGCTAGACGGTGGATAGCGTTTCCTCTCAGTTCAGGGTGAGGTAAAACCGCAGTGAAAACGGCAGACAAATCCAACCTTAGTTAGAccgttaggttttttttttttccttcactcccCACATACTCAAGTCCTTCTGTctgcaccaaaaataaataaataaataaaccccgGACTGAACTGCAGATCCCGGAAGAGGCTTGGAGATTAAACAGGTTTGAGGTTTTAGACGCTGAACTTTAATCTTTGTAAATAGAAACCGCAACTGCGCGGTTCACTACAAGGGGATTTAAAACCTCCGATGATCCTGTCACCTTTAATTTATTAATGACTTGCTGTAAGATATTGTGTAGGTCAGACGAAATCAGGACATGATTGATTATAGGCTGCGGATTCGCACAGGGAGGAAGTGGCGACCAGATCAGACAAGCTTCTATTTCCTCTTTGTATATTTGGTAATCGTTTTTTTGTCATATATGTAAATATTGTGATGGTTAGGAAAGCCGGGCATGTACGCGGGCCATAAAAAAACGAataagaggagaaaaaaaaagaagaagaagaataaaaagaagagaaaaagaaaCCCTCCCTCACTCACACGTTTCATTATTTATgaggaacaaaaaaatattaatgttgaCGTTTTTGTATCGGACACTTTGCACCCATACTTTattggttttgtttggttttttaggCCCATTCTTCATTGTATAATTTGTGCATTGatgtttgttgtatttaaatattataatcatATGTGACTATTACGTTGTACAACCACAGCAAGCAATATCCTCGTAGCCAAGAGTGACTGAAAAAAAAGACCCATTTATTCAAATCCGTACACATATTTTGGTTCACGTCCCCTCTTAGAAAAGGATATTTTTCAATCAGCGACGATATGATACTGACATATAGTCATTTTACTACTGAGGTGTAACTATTAGCGGGTACGGaaatgaaaatatgaataaattatgcaaagAGTTTGCTGATCTGCCTTGTCATTGGCCATGGGATGTGAATATTCATGAGACGGCGGCGCATACATAACGTGCAACTCTGTCTCGGTTTAGGCGAGTGGTCAGTACTGTATATTTGATTTGTACATTTGCTAAATATcatttggtttctttttttttgccagaTGTATCTGATCATGACTGCatataattttctatttaatttatttagtttgtccGCATTGATTTGTGGCGAGGAGAGGCGTAGTTTATTGGCCGGAAGTAAACAACGGATGATTTATTTAGATtcagatgtcttttttttttattattcagtccCCACCTGCTGTCTCATGCATTTGCTGCAACTTGAATAAGCCAGAATCTCACAGGTGTCtcttaaaaatgttgaaatattaATTCATGCCAATATATAGATcaataactgtaaaataaaattgtttcctTTTTGTcgtatttacaataaaacaaaccaaaacatg

Function

GO:

id name namespace
GO:0016358 dendrite development biological_process
GO:0007416 synapse assembly biological_process
GO:0008104 protein localization biological_process
GO:0005829 cytosol cellular_component
GO:0016020 membrane cellular_component
GO:0019901 protein kinase binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050320-68 Predicted to enable protein kinase binding activity. Acts upstream of or within dendrite development and synapse assembly. Predicted to be active in cytosol and membrane. Is expressed in nervous system; neural tube; and optic vesicle. Orthologous to human NBEA (neurobeachin).

Ensembl:

ensembl_id ENSDART00000102566

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00005918 lncRNA upstream 186418 34239060 ~ 34239838 (+) True XLOC_002263
TCONS_00005917 lncRNA upstream 232950 34190542 ~ 34193306 (+) True XLOC_002261
TCONS_00005916 lncRNA upstream 367939 34057291 ~ 34058317 (+) False XLOC_002256
TCONS_00005725 lncRNA upstream 555244 33870189 ~ 33871012 (+) True XLOC_002252
TCONS_00005724 lncRNA upstream 1058091 33363402 ~ 33368165 (+) True XLOC_002245
TCONS_00005919 lncRNA downstream 319316 35054311 ~ 35058561 (+) True XLOC_002269
TCONS_00004341 lncRNA downstream 417946 35152941 ~ 35156528 (+) False XLOC_002270
TCONS_00005920 lncRNA downstream 501353 35236348 ~ 35242028 (+) True XLOC_002271
TCONS_00004348 lncRNA downstream 556236 35291231 ~ 35292231 (+) True XLOC_002274
TCONS_00005921 lncRNA downstream 634597 35369592 ~ 35389697 (+) False XLOC_002277
TCONS_00004328 mRNA upstream 21488 34394454 ~ 34404768 (+) True XLOC_002264
TCONS_00004325 mRNA upstream 23721 34315719 ~ 34402535 (+) False XLOC_002264
TCONS_00004327 mRNA upstream 31432 34377697 ~ 34394824 (+) False XLOC_002264
TCONS_00004326 mRNA upstream 56050 34321492 ~ 34370206 (+) False XLOC_002264
TCONS_00004324 mRNA upstream 189832 34236168 ~ 34236424 (+) True XLOC_002262
TCONS_00004336 mRNA downstream 223588 34958583 ~ 34961758 (+) True XLOC_002267
TCONS_00004337 mRNA downstream 267791 35002786 ~ 35011502 (+) False XLOC_002268
TCONS_00004340 mRNA downstream 417933 35152928 ~ 35163612 (+) False XLOC_002270
TCONS_00004343 mRNA downstream 418105 35153100 ~ 35163611 (+) True XLOC_002270
TCONS_00004344 mRNA downstream 522656 35257651 ~ 35262368 (+) True XLOC_002272
TCONS_00004321 other upstream 239267 34175468 ~ 34186989 (+) False XLOC_002260
TCONS_00004320 other upstream 254831 34151286 ~ 34171425 (+) True XLOC_002259
TCONS_00004319 other upstream 279011 34124421 ~ 34147245 (+) True XLOC_002258
TCONS_00004318 other upstream 305955 34108541 ~ 34120301 (+) True XLOC_002257
TCONS_00004316 other upstream 339907 34067879 ~ 34086349 (+) False XLOC_002256
TCONS_00004333 other downstream 202553 34937548 ~ 34951865 (+) False XLOC_002266
TCONS_00004334 other downstream 215100 34950095 ~ 34951532 (+) False XLOC_002266
TCONS_00004335 other downstream 216061 34951056 ~ 34951532 (+) True XLOC_002266
TCONS_00004338 other downstream 267803 35002798 ~ 35009437 (+) False XLOC_002268
TCONS_00004339 other downstream 270900 35005895 ~ 35009096 (+) True XLOC_002268

Expression Profile

//

Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000304_16565077_16641637.mRNA True 9245 mRNA 0.50 57 CI01000304 16565077 ~ 16642341 (+)
bowfin (Amia calva) AMCG00016130 True 4428 mRNA 0.56 24 CM030122.1 8594090 ~ 8644348 (-)