RNA id: TCONS_00007621


Basic Information

Item Value
RNA id TCONS_00007621
length 297
RNA type misc_RNA
GC content 0.58
exon number 1
gene id XLOC_003991
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12351259 ~ 12351555 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCGGGTTCAGTGGCGCGCGCCTGTAATCCAAGCTACTGGGAGGCTGAGGCTGCGAAttgcttgagctcagggcttctggACTGCAGTGGACTATGTTGATCAGGTGTCCACACTAAGTTCGGTATCGATATGGTGCTCCTGGGGGAGCTTGGGACCACCAGGTCGTGTAATGAGGGGTGAACCGGCCCAGGTCGGCGACGGAGCAGGTCAAATCCCCCGTGCTGATCAGTAGTGGGATCACACCTGAGAATAGACACTGCAGTGCAGCCTGAgcgacacagagagacgcagacttT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000192812

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007602 lncRNA downstream 131290 12218106 ~ 12219969 (-) False XLOC_003978
TCONS_00007600 lncRNA downstream 137828 12213149 ~ 12213431 (-) True XLOC_003977
TCONS_00007594 lncRNA downstream 165115 12185854 ~ 12186144 (-) True XLOC_003975
TCONS_00007591 lncRNA downstream 185252 12165723 ~ 12166007 (-) True XLOC_003972
TCONS_00008770 lncRNA downstream 645123 11646506 ~ 11706136 (-) True XLOC_003962
TCONS_00008771 lncRNA upstream 77828 12429383 ~ 12430109 (-) False XLOC_003997
TCONS_00008772 lncRNA upstream 77828 12429383 ~ 12491279 (-) True XLOC_003997
TCONS_00008773 lncRNA upstream 78600 12430155 ~ 12465409 (-) True XLOC_003998
TCONS_00008774 lncRNA upstream 112145 12463700 ~ 12464486 (-) True XLOC_004002
TCONS_00007671 lncRNA upstream 382576 12734131 ~ 12741136 (-) False XLOC_004023
TCONS_00007619 mRNA downstream 840 12348479 ~ 12350419 (-) False XLOC_003990
TCONS_00007620 mRNA downstream 1022 12348884 ~ 12350237 (-) True XLOC_003990
TCONS_00007617 mRNA downstream 16713 12332626 ~ 12334546 (-) False XLOC_003989
TCONS_00007618 mRNA downstream 16885 12333031 ~ 12334374 (-) True XLOC_003989
TCONS_00007615 mRNA downstream 28574 12321345 ~ 12322685 (-) True XLOC_003987
TCONS_00007622 mRNA upstream 10676 12362231 ~ 12364122 (-) False XLOC_003992
TCONS_00007623 mRNA upstream 10774 12362329 ~ 12363941 (-) True XLOC_003992
TCONS_00007624 mRNA upstream 26066 12377621 ~ 12379541 (-) False XLOC_003993
TCONS_00007625 mRNA upstream 26164 12377719 ~ 12379359 (-) True XLOC_003993
TCONS_00007626 mRNA upstream 41160 12392715 ~ 12394682 (-) False XLOC_003994
TCONS_00007616 other downstream 27333 12323630 ~ 12323926 (-) True XLOC_003988
TCONS_00007613 other downstream 61591 12289372 ~ 12289668 (-) True XLOC_003985
TCONS_00007611 other downstream 97103 12253860 ~ 12254156 (-) True XLOC_003983
TCONS_00007606 other downstream 118359 12229830 ~ 12232900 (-) False XLOC_003980
TCONS_00007605 other downstream 130073 12220890 ~ 12221186 (-) True XLOC_003979
TCONS_00007628 other upstream 43963 12395518 ~ 12395814 (-) True XLOC_003995
TCONS_00007634 other upstream 86529 12438084 ~ 12438380 (-) True XLOC_004000
TCONS_00007645 other upstream 148411 12499966 ~ 12500262 (-) True XLOC_004006
TCONS_00007648 other upstream 161411 12512966 ~ 12513262 (-) True XLOC_004008
TCONS_00007656 other upstream 239444 12590999 ~ 12591296 (-) True XLOC_004013

Expression Profile

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