GENE ID: ENSDARG00000077467

Symbol Location Gene type Genome version Species
sox10 3: 1492174 ~ 1501255 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000077467 (sox10), yellow represents other genes.
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  • The more connections, the bigger symbol size.


    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Neural crest (cluster: 12)
    Neural crest (cluster: 13)
    		 marker
    marker
    		 DOI:10.1126/science.aar3131
    DOI:10.1126/science.aar3131
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo Neural crest (cluster: 11)
    		 marker
    		 DOI:10.1126/science.aar3131
    PRJNA706197 (12hpf) embryo baseline 12hpf, FACS sorted sox10:nEOS cells Neural crest (cluster: 1)
    Neural crest (cluster: 2)
    		 marker
    marker
    		 DOI:10.1016/j.celrep.2021.110140
    DOI:10.1016/j.celrep.2021.110140
    PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells Neural crest (cluster: 1)
    		 marker
    		 DOI:10.1016/j.celrep.2021.110140
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells Neural crest (cluster: 3)
    		 marker
    		 DOI:10.1016/j.celrep.2021.110140
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Neural crest (cluster: 8)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors Melanoma cells (cluster: 1)
    Melanoma cells (cluster: 2)
    Melanoma cells (cluster: 3)
    Melanoma cells (cluster: 4)
    Melanoma cells (cluster: 5)
    Melanoma cells (cluster: 6)
    Melanoma cells (cluster: 7)
    Melanoma cells (cluster: 8)
    		 marker
    marker
    marker
    marker
    marker
    marker
    marker
    marker
    		 DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors Melanoma cells (cluster: 1)
    Melanoma cells (cluster: 2)
    Melanoma cells (cluster: 3)
    Melanoma cells (cluster: 4)
    Melanoma cells (cluster: 5)
    Melanoma cells (cluster: 6)
    Melanoma cells (cluster: 7)
    		 marker
    marker
    marker
    marker
    marker
    marker
    marker
    		 DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases Melanoma cells (cluster: 1)
    Melanoma cells (cluster: 2)
    Melanoma cells (cluster: 3)
    Melanoma cells (cluster: 4)
    Melanoma cells (cluster: 5)
    Melanoma cells (cluster: 6)
    Melanoma cells (cluster: 7)
    Melanoma cells (cluster: 8)
    		 marker
    marker
    marker
    marker
    marker
    marker
    marker
    marker
    		 DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases Melanoma cells (cluster: 1)
    Melanoma cells (cluster: 2)
    Melanoma cells (cluster: 3)
    Melanoma cells (cluster: 4)
    Melanoma cells (cluster: 5)
    Melanoma cells (cluster: 6)
    Melanoma cells (cluster: 7)
    Melanoma cells (cluster: 8)
    		 marker
    marker
    marker
    marker
    marker
    marker
    marker
    marker
    		 DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    PRJNA641144 (D_INV) tumor disease adult, ZMEL1-INV cells in vitro individual culture Melanoma cells (cluster: 1)
    Melanoma cells (cluster: 2)
    Melanoma cells (cluster: 3)
    Melanoma cells (cluster: 4)
    Melanoma cells (cluster: 5)
    		 marker
    marker
    marker
    marker
    marker
    		 DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    PRJNA641144 (D_PRO) tumor disease adult, ZMEL1-PRO cells in vitro individual culture Melanoma cells (cluster: 1)
    Melanoma cells (cluster: 2)
    Melanoma cells (cluster: 3)
    Melanoma cells (cluster: 4)
    		 marker
    marker
    marker
    marker
    		 DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture Melanoma cells (cluster: 1)
    Melanoma cells (cluster: 2)
    Melanoma cells (cluster: 3)
    Melanoma cells (cluster: 4)
    Melanoma cells (cluster: 5)
    		 marker
    marker
    marker
    marker
    marker
    		 DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    PRJNA641144 (C_PRO) tumor disease adult, ZMEL1-PRO cells in vitro co-culture Melanoma cells (cluster: 1)
    Melanoma cells (cluster: 2)
    Melanoma cells (cluster: 3)
    Melanoma cells (cluster: 4)
    		 marker
    marker
    marker
    marker
    		 DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    DOI:10.1016/j.devcel.2021.08.018
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Oligodendrocyte precursor cells (cluster: 21)
    		 potential marker
    		 NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Oligodendrocytes (cluster: 5)
    		 potential marker
    		 NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Glia (cluster: 12)
    		 potential marker
    		 NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Neuron (cluster: 17)
    		 potential marker
    		 NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Oligodendrocytes (cluster: 14)
    Pigment cells (cluster: 19)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Neural crest cells (cluster: 14)
    Oligodendrocytes (cluster: 15)
    Pigment cells (cluster: 17)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry Xanthophores (cluster: 4)
    Melanophores (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells Pre-myelinating oligodendrocyte (cluster: 4)
    		 potential marker
    		 NA
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells Neural crest (cluster: 6)
    		 potential marker
    		 NA
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells Epithelial cells (cluster: 2)
    		 potential marker
    		 NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Iridophore (cluster: 18)
    Oligodendrocytes (cluster: 22)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Somites (cluster: 12)
    Melanophores (cluster: 21)
    Xanthophores (cluster: 25)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Neutrophils (cluster: 8)
    		 potential marker
    		 NA
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Neural crest (cluster: 9)
    		 potential marker
    		 NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Neural crest (cluster: 10)
    		 potential marker
    		 NA
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Placode (cluster: 13)
    Neural crest (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Neural crest (cluster: 14)
    		 potential marker
    		 NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Pigment cell (neural crest derived) (cluster: 12)
    Optic vesicle (cluster: 14)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Pigment cell (neural crest derived) (cluster: 13)
    		 potential marker
    		 NA
    GSE158142 (2dpf) head baseline 2dpf, untreatment Chondrocytes (cluster: 6)
    		 potential marker
    		 NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Otic vesicle (cluster: 14)
    		 potential marker
    		 NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Oligodendrocytes (cluster: 15)
    Oligodendrocyte precursor cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment Muller glia cells (cluster: 9)
    		 potential marker
    		 NA
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih Astrocyte (cluster: 18)
    		 potential marker
    		 NA
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih Astrocyte (cluster: 15)
    		 potential marker
    		 NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Schwann cells (cluster: 1)
    Schwann cell precursor (cluster: 2)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Chondrocytes (cluster: 16)
    Xanthophores (cluster: 33)
    Oligodendrocytes (cluster: 40)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Chondrocytes (cluster: 3)
    		 potential marker
    		 NA
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
    GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
    GSE151354 (wild type) cartilage baseline 21dpf, wild type
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
    GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled)
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
    PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury
    PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury
    PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured
    PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury
    PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
    GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
    GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
    GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
    GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
    GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
    GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-

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