RNA id: TU221643


Basic Information

Item Value
RNA id TU221643
length 205
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G149786
representative True

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5653683 ~ 5653887 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCTAAGGGCAGTTGCGCTTTCTTGACCATGTATGAAAGAGACGCGGATCGTGACTTAAAAACCGATCCTGGAACAGCGGCTGCGAAGACGAGATGGAACGAACCATTTCGTCTCGGCGGGGGTCGGATTTTCAGAATACGGAAAAACGGCGCTTTCGCTGCTTAAACAGGCAAGAGGAGATTTTTATTACTGAGGTATAACAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU221605 lncRNA upstream 42867 5609797 ~ 5610816 (+) True G149762
TU221564 lncRNA upstream 120852 5531865 ~ 5532831 (+) True G149733
TU221556 lncRNA upstream 158693 5486341 ~ 5494990 (+) True G149729
TU221542 lncRNA upstream 196339 5455573 ~ 5457344 (+) False LOC122327428
TU221540 lncRNA upstream 215248 5436837 ~ 5438435 (+) True G149720
TU221649 lncRNA downstream 14578 5668465 ~ 5671375 (+) True G149790
TU221671 lncRNA downstream 85685 5739572 ~ 5746316 (+) False G149806
TU221672 lncRNA downstream 85685 5739572 ~ 5746316 (+) True G149806
TU221681 lncRNA downstream 98345 5752232 ~ 5752496 (+) True G149809
TU221683 lncRNA downstream 99292 5753179 ~ 5753718 (+) True G149810
XM_043222771.1 mRNA upstream 50408 5590344 ~ 5603275 (+) True ccdc71
XM_043222960.1 mRNA upstream 65341 5583929 ~ 5588342 (+) True kctd6a
XM_043222749.1 mRNA upstream 70642 5578185 ~ 5583041 (+) True pdhb
XM_043222624.1 mRNA upstream 76681 5562678 ~ 5577002 (+) False pxk
XM_043222627.1 mRNA upstream 78112 5561282 ~ 5575571 (+) False pxk
XM_043222992.1 mRNA downstream 142 5654029 ~ 5655379 (+) True wu:fb55g09
XM_043222845.1 mRNA downstream 19124 5673011 ~ 5725208 (+) True LOC122327460
XM_043222596.1 mRNA downstream 80522 5734409 ~ 5743120 (+) False LOC122327321
XM_043222597.1 mRNA downstream 80529 5734416 ~ 5743120 (+) False LOC122327321
XM_043222598.1 mRNA downstream 80574 5734461 ~ 5745051 (+) True LOC122327321
TU221516 other upstream 198256 5453165 ~ 5455427 (+) False LOC122327428
TU221415 other upstream 549247 5103529 ~ 5104436 (+) True G149646
XR_006247646.1 other upstream 937731 4712862 ~ 4715952 (+) True LOC122327517
TU220805 other upstream 1415614 4237454 ~ 4238069 (+) False LOC122327447
TU220637 other upstream 1800312 3852063 ~ 3853371 (+) True G149157
XR_006247632.1 other downstream 80521 5734408 ~ 5742638 (+) False LOC122327321
TU221709 other downstream 149889 5803776 ~ 5806623 (+) False tusc2b
TU221722 other downstream 193281 5847168 ~ 5848586 (+) False lsm7
TU221826 other downstream 537760 6191647 ~ 6192659 (+) True G149895
TU221839 other downstream 584400 6238287 ~ 6239357 (+) False npb

Expression Profile