RNA id: TU45771



Basic Information


Item Value
RNA id TU45771
length 204
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G40379
representative True

Chromosome Information


Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6939091 ~ 6939294 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CAACGCACCCCATATATTCCATCACATCCTGCACTCCTTTGTCTGGTCTTGTCATTCCCATGTGAACAGACTCCTTTCCTGCTACTCACCTGTGTACTTACCTGCCACCAAGGATCCTGTGTTCTGTCGTCTGCTACCAGCCCATCGAGTGTACCTACCAGTCCTCCTCCTGCATCTGCCAAAAAGACATTCATACTACATTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45770 lncRNA downstream 437 6938427 ~ 6938654 (-) True G40378
TU45735 lncRNA downstream 185074 6753816 ~ 6754017 (-) True G40349
TU45695 lncRNA downstream 257842 6680036 ~ 6681249 (-) True G40316
TU45692 lncRNA downstream 287173 6651688 ~ 6651918 (-) True G40313
TU45689 lncRNA downstream 290723 6648152 ~ 6648368 (-) True G40310
TU45775 lncRNA upstream 3817 6943111 ~ 6945572 (-) True G40382
TU45812 lncRNA upstream 54023 6993317 ~ 7090894 (-) True G40403
TU45818 lncRNA upstream 58288 6997582 ~ 6998343 (-) False G40407
TU45819 lncRNA upstream 58327 6997621 ~ 6998343 (-) True G40407
TU45820 lncRNA upstream 59959 6999253 ~ 6999872 (-) True G40408
CI01000005_06815976_06894322.mRNA mRNA downstream 44506 6815378 ~ 6894585 (-) True CI01000005_06815976_06894322
CI01000005_06772433_06793278.mRNA mRNA downstream 145813 6772433 ~ 6793278 (-) True CI01000005_06772433_06793278
CI01000005_06765592_06772165.mRNA mRNA downstream 166926 6765273 ~ 6772165 (-) True CI01000005_06765592_06772165
CI01000005_06721142_06724797.mRNA mRNA downstream 214258 6720908 ~ 6724833 (-) True CI01000005_06721142_06724797
CI01000005_06655061_06664135.mRNA mRNA downstream 274751 6654881 ~ 6664340 (-) True CI01000005_06655061_06664135
CI01000005_07018058_07025374.mRNA mRNA upstream 77547 7016841 ~ 7025374 (-) True CI01000005_07018058_07025374
CI01000005_07035672_07037203.mRNA mRNA upstream 95483 7034777 ~ 7037276 (-) True CI01000005_07035672_07037203
CI01000005_07052874_07068345.mRNA mRNA upstream 113436 7052730 ~ 7068377 (-) True CI01000005_07052874_07068345
CI01000005_07093538_07094533.mRNA mRNA upstream 154188 7093482 ~ 7094569 (-) True CI01000005_07093538_07094533
CI01000005_07111233_07112234.mRNA mRNA upstream 171428 7110722 ~ 7112266 (-) True CI01000005_07111233_07112234
TU45564 other downstream 455602 6480689 ~ 6483489 (-) True G40190
TU44763 other downstream 1104552 5833792 ~ 5834539 (-) True G39515
TU44762 other downstream 1104699 5833792 ~ 5834392 (-) False G39515
TU43542 other downstream 2537981 4381238 ~ 4401110 (-) True G38415
TU43637 other downstream 2732883 4204845 ~ 4206208 (-) True G38510
TU45920 other upstream 256501 7195795 ~ 7196428 (-) True G40487
TU46013 other upstream 586927 7526221 ~ 7532148 (-) True G40540

Expression Profile