RNA id: CI01000050_03573096_03586434.mRNA


Basic Information

Item Value
RNA id CI01000050_03573096_03586434.mRNA
length 2669
RNA type mRNA
GC content 0.48
exon number 11
gene id CI01000050_03573096_03586434
representative True

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3573096 ~ 3587311 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GATTAGCATTTCCTGCCTGTTTCCAGCATCCTGGCACTTCAGCCTATCTCCGGTGGTGCTGCCCCGGTTCCTGCTGCCCTCCTTCAGGCAGTTGCTGCTGCTGGGTCTGCTGGCTGGTGTGATGGGGCTGCTGTACCTCCTGCTGGTCACAGGGAAGGGCCAGTACAGCTGGATGAGAGAGGACAGGCACCTCCACACACGTTTGGGTCGGGTGCCGGACATGGAGGCCACGGACACCAATAACCCCAACCTGAACTACGGGCTGGTGGTGGACTGTGGAAGTAGTGGCTCCCGCGTGTTCGTATACACATGGCCCCGGCACAACGGCAACCTGCACGAGCTCCTAGACATCAAGCAGATGCGAGACAAGCACAGGAAGCCTGTAGTGATGAAGATCAAGCCAGGTATTTCAGAGTATGCATCCACTCCAGACAAGGCCAGTGACTACATCAGCCCTCTGCTGAGCTTTGCTGCTCAGCACATCCCTAAAAACAAGCACCAGGAAACGCCTCTCTACATCCTGTGCACTGCGGGAATGAGAGTCCTGCCTGAAAGCCAGCAGGAGGCCCTGCTGGAGGATTTGCGGACTGACATTCCTGTGAATTTCAACTTCCTTTTCTCTGACTCCCATGTGGAAGTTATCTCAGGCAAACAGGAAGGAGTATATGCATGGATAGGTATCAACTTTGTTCTGGGCCGATTCAATCATGTTGAGGATGAACATGAGGCAGTGGTGGAGGTGCAGGTCCCTGGCAGTGACCAGCAGGAGACGCTGGTGCGCAAGCGTACGGCTGGCGTACTGGACATGGGCGGCGTCTCCACTCAGATCGCATACGAAGTGCCCAAAACTGAAGAGATAGCCAAGAATTTGCTGGCGGAGTTTAACCTGGGCTGCGACGCTCACAGAACAGAACACGTGTACCGTGTTTACGTCTCAACATTTTTGGGTTTCGGAGGAAATGCGGCCCGCCAGAGATATGAGGAAAACCTCATCAGCACCACACAAACCCAAAACAAGCTCCTGGGTCAGCATCAAGGAGAGAGCGCAGACTCGCCCATCCTCGACCCCTGCCTGCCAGCTGACCTCCAGGATGAGGTGGGTCCCCAGGACCAGAGGGTGCACCTGCGTGGCACTGGAGACTTCGACCGTTGCCGTCTGCTGCTCCAGCCGTTCCTCAACCGCACCAATGACACCAACACCTCGCTTAACGGAGTCTACCAGCCGCCTATCGACTTCCCAAACAGCCAGTTCTACGGCTTCTCTGAGTTTTACTACTGCACTGAAGATGTGCTGCGCATGGGAGGAGACTACAACTCCACCAAATATTCCAATGCTGCTAAGAGTTACTGTGCCACCCAGTGGAAAACTTTGAAAGAGCGCTTTGATCGAGGTCTTTACGCCTCACATGCTGACCAGCATAGATTGAAGTATCAGTGCTTCAAGTCTGCGTGGATGTATGAGGTGCTCCACTCAGGTTTCGCATTTCCAGCGGCGTACGAGAATCTCAGGACGGCACTGCTGGTGTATGACAAAGAAGTACAGTGGACACTAGGAGCCATTTTGTACCGCACACGTTTTCTACCTCTAAGTGGCTGGAAGAGGGCCTGGGTTCACCAGACCTCCCTGTTACCCTATAGGGCCTGGAGCCTGTCAGTCAAACAACTGGCCAATCACTGGAGGAGAGCCTTCTTGACACACCTCTCCAATGAAGGCGCTTTGCTTTTTAAAAATGAGTCCCACTCCTACAATCGTCATGTCGGCCCTCTACTGGCCAGTTTTGCATTTTCCTAAAATTCTGTATGACATTTTCAGCCAAGACCAGTGAACGTTCACCGTAATGTGAAGACTGCAGCTCCAGTTTTTGCCCAGACTGGACCGTATGACTGCCTCTAATCAGCTGTGATGTTTCGTTGTTTATTTATTGTGAGGAACGCTGAGGCTGCCTTTGGATTTTCAATGTCACTATCAATGTGAAAGAGGTCAGGAGGATTGAGTATGGTTTATATACTGTACGTGTCCCCAATTTGGATTTATATACATCACAGTTTAGACGAGATTTTGCCGGCTGCTGCCTCAACTCAAGACTACGCATAATTGAACATTTATTAAATGACTTGGTTGTGCCAAAGAGAAATAGATTGAGATTCATTTTAAAGGATGAATGTGAAATGTTTTTAACACCAAAAACATTTTTTTTTGTCTGTTCAAAACTCTTTTTCTTGGGGTTTTTAGACACTGAAGTTGGACTGCTTGGATACCATGATAGAAAGCTAATCCGTTTTAAAATCCCTTTAGCATGTAAAAAAAAAAACAGGCACATTTAGAAAGTTCTAATAGGATTCAGAAGTTTTGGTCACCTTTTTTCTACCTAAACACTTTTCCATGAAATGTAAACAACATTAAATATCCATCTGTCTTATTTTAAAAAGCACTATGTACATTCTGAAGGAATGTTGAGGGAGAGACAGAAAAATGACTTCTGATTTTTTTTTTTTTTCATTCAAGGTTGTGCAAGACGGTTCATTGGTAAATATTACAGTGTTACAGTGTCAGAATTACTGCTTTATCATGGGAACTGCTTATTGCTTGTCTGTGAGTGTATATGATTGTGAGCATGTGTATATATGCGCACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K12305 ENTPD4, LALP70; ectonucleoside triphosphate diphosphohydrolase 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU241745 lncRNA upstream 22516 3550198 ~ 3550580 (+) True G213113
TU241706 lncRNA upstream 27985 3446464 ~ 3545111 (+) True G213074
TU241640 lncRNA upstream 361242 3211584 ~ 3211854 (+) True G213019
TU241637 lncRNA upstream 371454 3199786 ~ 3201642 (+) True G213016
TU241614 lncRNA upstream 382357 3190519 ~ 3190739 (+) True G213000
TU241791 lncRNA downstream 84581 3671892 ~ 3672877 (+) True G213153
TU243369 lncRNA downstream 141222 3728533 ~ 3728810 (+) True G214496
TU243373 lncRNA downstream 144657 3731968 ~ 3732173 (+) True G214500
TU243374 lncRNA downstream 150880 3738191 ~ 3738542 (+) True G214501
TU243376 lncRNA downstream 165731 3753042 ~ 3753268 (+) True G214503
CI01000050_03557372_03567755.mRNA mRNA upstream 5117 3557327 ~ 3567979 (+) True CI01000050_03557372_03567755
CI01000050_03552033_03552887.mRNA mRNA upstream 20173 3551122 ~ 3552923 (+) True CI01000050_03552033_03552887
CI01000050_03528076_03531738.mRNA mRNA upstream 40486 3527843 ~ 3532610 (+) True CI01000050_03528076_03531738
CI01000050_03448766_03465009.mRNA mRNA upstream 107229 3448766 ~ 3465867 (+) True CI01000050_03448766_03465009
CI01000050_03392003_03421994.mRNA mRNA upstream 150183 3392003 ~ 3422913 (+) True CI01000050_03392003_03421994
CI01000050_03599274_03618237.mRNA mRNA downstream 11963 3599274 ~ 3619040 (+) True CI01000050_03599274_03618237
CI01000050_03641769_03645039.mRNA mRNA downstream 51876 3639187 ~ 3645109 (+) True CI01000050_03641769_03645039
CI01000050_03679119_03683710.mRNA mRNA downstream 91769 3679080 ~ 3684169 (+) True CI01000050_03679119_03683710
CI01000050_03807697_03808793.mRNA mRNA downstream 220386 3807697 ~ 3808870 (+) False CI01000050_03807697_03808793
CI01000050_03814516_03818892.mRNA mRNA downstream 226109 3813420 ~ 3818939 (+) False CI01000050_03814516_03818892
TU241503 other upstream 707274 2842819 ~ 2843139 (+) True G212938
TU241491 other upstream 797963 2774839 ~ 2775133 (+) True G212927
TU240958 other upstream 1875688 1691803 ~ 1697408 (+) False CI01000050_01691894_01697791
TU240937 other upstream 2273490 1299364 ~ 1299606 (+) True G212403
TU240705 other upstream 3138890 433684 ~ 434206 (+) True G212184
TU243391 other downstream 217832 3805143 ~ 3808739 (+) False CI01000050_03807697_03808793
TU243394 other downstream 220303 3807614 ~ 3808739 (+) False CI01000050_03807697_03808793
TU243390 other downstream 220384 3807695 ~ 3808739 (+) True CI01000050_03807697_03808793
TU243465 other downstream 363291 3950602 ~ 3957044 (+) True CI01000050_03938328_03956122
TU243616 other downstream 520271 4107582 ~ 4108280 (+) True G214717

Expression Profile


Homologous

species RNA id representative length rna type GC content exon number chromosome id location
zebrafish (Danio rerio) TCONS_00070540 True 2673 mRNA 0.51 13 NC_007119.7 50150834 ~ 50180226 (+)