Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000496 |
| length | 1461 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 8 |
| gene id | XLOC_000302 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 25178106 ~ 25216235 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006310 | DNA recombination | biological_process |
| GO:0051321 | meiotic cell cycle | biological_process |
| GO:0007131 | reciprocal meiotic recombination | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003690 | double-stranded DNA binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040801-116 | Predicted to enable double-stranded DNA binding activity. Predicted to be involved in reciprocal meiotic recombination. Predicted to act upstream of or within DNA recombination and meiotic cell cycle. Predicted to be active in nucleus. Orthologous to human MND1 (meiotic nuclear divisions 1). |
| ensembl_id | ENSDART00000054265 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00002833 | lncRNA | upstream | 578118 | 24596326 ~ 24599988 (+) | False | XLOC_000300 |
| TCONS_00002832 | lncRNA | upstream | 578118 | 24596326 ~ 24599988 (+) | False | XLOC_000300 |
| TCONS_00002834 | lncRNA | upstream | 578118 | 24596893 ~ 24599988 (+) | False | XLOC_000300 |
| TCONS_00002835 | lncRNA | upstream | 578441 | 24597676 ~ 24599665 (+) | True | XLOC_000300 |
| TCONS_00003071 | lncRNA | upstream | 714801 | 24462460 ~ 24463305 (+) | True | XLOC_000297 |
| TCONS_00000499 | lncRNA | downstream | 3507 | 25218271 ~ 25256001 (+) | False | XLOC_000303 |
| TCONS_00000500 | lncRNA | downstream | 4363 | 25219127 ~ 25267709 (+) | True | XLOC_000303 |
| TCONS_00003072 | lncRNA | downstream | 225273 | 25440037 ~ 25442701 (+) | True | XLOC_000304 |
| TCONS_00003073 | lncRNA | downstream | 335289 | 25550053 ~ 25553145 (+) | False | XLOC_000305 |
| TCONS_00002836 | lncRNA | downstream | 335848 | 25550612 ~ 25553299 (+) | False | XLOC_000305 |
| TCONS_00000494 | mRNA | upstream | 619357 | 24557414 ~ 24558749 (+) | True | XLOC_000299 |
| TCONS_00000493 | mRNA | upstream | 663433 | 24482406 ~ 24514673 (+) | True | XLOC_000298 |
| TCONS_00000492 | mRNA | upstream | 666481 | 24469313 ~ 24511625 (+) | False | XLOC_000298 |
| TCONS_00000491 | mRNA | upstream | 786433 | 24387659 ~ 24391673 (+) | True | XLOC_000296 |
| TCONS_00000489 | mRNA | upstream | 792127 | 24382651 ~ 24385979 (+) | False | XLOC_000295 |
| TCONS_00000498 | mRNA | downstream | 3413 | 25218177 ~ 25316149 (+) | False | XLOC_000303 |
| TCONS_00000501 | mRNA | downstream | 436153 | 25650917 ~ 25666604 (+) | True | XLOC_000306 |
| TCONS_00000502 | mRNA | downstream | 482034 | 25696798 ~ 25698039 (+) | True | XLOC_000307 |
| TCONS_00000504 | mRNA | downstream | 517951 | 25732715 ~ 25733867 (+) | True | XLOC_000309 |
| TCONS_00000506 | mRNA | downstream | 569037 | 25783801 ~ 25799051 (+) | True | XLOC_000310 |
| TCONS_00000495 | other | upstream | 57901 | 25120089 ~ 25120205 (+) | True | XLOC_000301 |
| TCONS_00000490 | other | upstream | 793409 | 24382967 ~ 24384697 (+) | True | XLOC_000295 |
| TCONS_00000480 | other | upstream | 1063548 | 24114525 ~ 24114558 (+) | True | XLOC_000287 |
| TCONS_00000478 | other | upstream | 1311141 | 23866878 ~ 23866965 (+) | True | XLOC_000285 |
| TCONS_00000472 | other | upstream | 1426893 | 23751099 ~ 23751213 (+) | True | XLOC_000283 |
| TCONS_00000518 | other | downstream | 896621 | 26111385 ~ 26119624 (+) | True | XLOC_000317 |
| TCONS_00000557 | other | downstream | 2498585 | 27713349 ~ 27730980 (+) | False | XLOC_000329 |
| TCONS_00000565 | other | downstream | 2762606 | 27977370 ~ 28001937 (+) | False | XLOC_000332 |
| TCONS_00000567 | other | downstream | 2769629 | 27984393 ~ 27995611 (+) | True | XLOC_000332 |
| TCONS_00000579 | other | downstream | 3853898 | 29068662 ~ 29080336 (+) | False | XLOC_000337 |
