RNA id: TCONS_00000584



Basic Information


Item Value
RNA id TCONS_00000584
length 1214
RNA type mRNA
GC content 0.39
exon number 3
gene id XLOC_000339
representative True

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 29140884 ~ 29164911 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


CTTGAAGAATGCAAATGGTTTAGTTGCAGCTGACTTGGCTCATGCTCAAGGCTTCCATGATTGTGCTCAGCTCCTCTGTAATGCTCACAACCATATAAATCAGCTAAATGGATTCGGACATAATGGGACTGACCACGTACACATTCAGGGTCGCAGTCTTTTGAATGGGACAGCTAATAGGAAAAGATTTTTTGACGGCACAGAGCCAAACAATGTTAAAAAAGCAAGAACTGATAGAATGAATTCCTCAGTGAAGACAAACAGTGCAATTGGAGAAGAGTTTGAGAGTATGAATGTGGAATCCACTGCTGAAATACAATCAGATGAAGCCATAGCCACAGGTTTGAGGAATGGTCATGGGCATCACAACAGTTTCACTGTCAACAACTTCAGCACAAACGGGCAATGCtatgaatctttttttaatgGGGTTGAGACCATTCCAGCTGAACCAAGAATCGACATGTGTGGCTCTCTGCACCTCAGCGGCAGCCCAAGCAGCTGTGTGTCTCACCGACCGGCATGGGATGCATTTTCTCCAGATTCCAGTGAACATCTACATTATGGACACTACCATGGATTTGGGGATACGGCAGAGGACCTGGAAGATGCTAGCATCTGTCATGAACACAGTACAACTGTGAAAGTAGAGCGGCTCTATGACCAAGAAGTTCTCAGTGCCGTACAGCTGTTCCATGGATGTTAAAATCCATGAAATTTGATTGTAAAAATGGTCATATTGATGGCATTACAATCAGCCTTAAACTGAATGGTTGTCTTGCACCTTAATGCAGGCAGTAATAAgagtttttgtttgttataaatGGGGAAAATCTTTCTACCAAAGGGAAGCAAATATATTGCATTTTTGTACCTGACCTGACttaatgactttattttattatatgtatgtGTTTGAACTCAGCTTAGCCTAATGGGTGCATTTCATTTTCCCCTATAataaaatgttagaatgttcaGATGTACAAGGAGTTGATTTTGTGTATGGATTTATAGTTAATTGGTAGTTTTGTGAAAGTGAATACAAGCTTTTTGAAAAGGAGAATTTTGTACGATTTGTTgtattactttttttactttttcctgAGAAGCAAAGCTTACATGCTCACTGTAAAACTGTTTATTGAAAGATGTATGACATTCCTTCATCTTTGTACCTTATGTTTTGATTAAAAACCATGTGTACATTAAAA

Function


GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-700 Orthologous to human ANKRD10 (ankyrin repeat domain 10).

Ensembl:

ensembl_id ENSDART00000141441

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00000577 lncRNA upstream 91122 29068649 ~ 29071356 (+) False XLOC_000337
TCONS_00000576 lncRNA upstream 257843 28903770 ~ 28904635 (+) True XLOC_000336
TCONS_00003080 lncRNA upstream 689065 28472199 ~ 28473413 (+) True XLOC_000335
TCONS_00000568 lncRNA upstream 1126330 28031697 ~ 28036148 (+) False XLOC_000333
TCONS_00000585 lncRNA downstream 9845 29174195 ~ 29180648 (+) True XLOC_000340
TCONS_00000588 lncRNA downstream 13795 29178145 ~ 29179934 (+) False XLOC_000341
TCONS_00000587 lncRNA downstream 13795 29178145 ~ 29179934 (+) False XLOC_000341
TCONS_00000591 lncRNA downstream 19622 29183972 ~ 29185269 (+) True XLOC_000342
TCONS_00000595 lncRNA downstream 147177 29311527 ~ 29312559 (+) True XLOC_000346
TCONS_00000583 mRNA upstream 19980 29140981 ~ 29142498 (+) False XLOC_000339
TCONS_00000581 mRNA upstream 61555 29096881 ~ 29100923 (+) True XLOC_000338
TCONS_00000578 mRNA upstream 68916 29068654 ~ 29093562 (+) False XLOC_000337
TCONS_00000580 mRNA upstream 69479 29070661 ~ 29092999 (+) True XLOC_000337
TCONS_00000575 mRNA upstream 967211 28089703 ~ 28195267 (+) True XLOC_000334
TCONS_00000586 mRNA downstream 13767 29178117 ~ 29179930 (+) False XLOC_000341
TCONS_00000589 mRNA downstream 13981 29178331 ~ 29179533 (+) True XLOC_000341
TCONS_00000590 mRNA downstream 19612 29183962 ~ 29202689 (+) False XLOC_000342
TCONS_00000592 mRNA downstream 47190 29211540 ~ 29228393 (+) True XLOC_000343
TCONS_00000593 mRNA downstream 103491 29267841 ~ 29271473 (+) True XLOC_000344
TCONS_00000579 other upstream 82142 29068662 ~ 29080336 (+) False XLOC_000337
TCONS_00000565 other upstream 1160541 27977370 ~ 28001937 (+) False XLOC_000332
TCONS_00000567 other upstream 1166867 27984393 ~ 27995611 (+) True XLOC_000332
TCONS_00000557 other upstream 1431498 27713349 ~ 27730980 (+) False XLOC_000329
TCONS_00000518 other upstream 3042854 26111385 ~ 26119624 (+) True XLOC_000317
TCONS_00000608 other downstream 667409 29831759 ~ 29860373 (+) False XLOC_000356
TCONS_00000617 other downstream 1001603 30165953 ~ 30166065 (+) True XLOC_000360
TCONS_00000618 other downstream 1063041 30227391 ~ 30227505 (+) True XLOC_000361
TCONS_00000628 other downstream 1791575 30955925 ~ 30965004 (+) True XLOC_000366
TCONS_00000632 other downstream 1892890 31057240 ~ 31063850 (+) True XLOC_000367

Expression Profile


//