RNA id: TCONS_00007610


Basic Information

Item Value
RNA id TCONS_00007610
length 429
RNA type mRNA
GC content 0.50
exon number 4
gene id XLOC_003982
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12251840 ~ 12252838 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGTCTTGTGTTCATTACAGGTTTCAGAGTCGACTCACCTACGACTCGCTCCAGTTTGAGGGCCTCAACATCACTGTGGGAGAGCTGAAGCGACAGATCATGAGGCGCGAGAGGCTGAAGTTCTGCCAGCTGAAGATCAGCAAAGCCCAAACTGATGAAGaataCACAGATGATGATGCTCTCATCCCTAAAAACACATCGGTCATCATCAGACGGGTCCCTGCGGCTGGACTGAAGTCCTCCAACAGAAGATTTGTTGGacatcaagctGGATTATCAGCCAAATCTTCTCAAACAGGTGATTCTTCACTCCTCTCACTGGAGCAGCTGTTGGAGactgagaatctggctgaggcaaaggcatcagaggaggacaagctaaaagcggtgatgtaccagtccagtctgtgctactactccagcaggtga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000171470

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007602 lncRNA downstream 31871 12218106 ~ 12219969 (-) False XLOC_003978
TCONS_00007600 lncRNA downstream 38409 12213149 ~ 12213431 (-) True XLOC_003977
TCONS_00007594 lncRNA downstream 65696 12185854 ~ 12186144 (-) True XLOC_003975
TCONS_00007591 lncRNA downstream 85833 12165723 ~ 12166007 (-) True XLOC_003972
TCONS_00008770 lncRNA downstream 545704 11646506 ~ 11706136 (-) True XLOC_003962
TCONS_00008771 lncRNA upstream 176545 12429383 ~ 12430109 (-) False XLOC_003997
TCONS_00008772 lncRNA upstream 176545 12429383 ~ 12491279 (-) True XLOC_003997
TCONS_00008773 lncRNA upstream 177317 12430155 ~ 12465409 (-) True XLOC_003998
TCONS_00008774 lncRNA upstream 210862 12463700 ~ 12464486 (-) True XLOC_004002
TCONS_00007671 lncRNA upstream 481293 12734131 ~ 12741136 (-) False XLOC_004023
TCONS_00007609 mRNA downstream 8545 12241936 ~ 12243295 (-) True XLOC_003981
TCONS_00007607 mRNA downstream 18911 12229830 ~ 12232929 (-) False XLOC_003980
TCONS_00007608 mRNA downstream 19071 12230234 ~ 12232769 (-) True XLOC_003980
TCONS_00007603 mRNA downstream 31838 12218106 ~ 12220002 (-) False XLOC_003978
TCONS_00007601 mRNA downstream 31909 12218106 ~ 12219931 (-) False XLOC_003978
TCONS_00007612 mRNA upstream 34102 12286940 ~ 12288326 (-) True XLOC_003984
TCONS_00007614 mRNA upstream 47741 12300579 ~ 12301939 (-) True XLOC_003986
TCONS_00007615 mRNA upstream 68507 12321345 ~ 12322685 (-) True XLOC_003987
TCONS_00007617 mRNA upstream 79788 12332626 ~ 12334546 (-) False XLOC_003989
TCONS_00007618 mRNA upstream 80193 12333031 ~ 12334374 (-) True XLOC_003989
TCONS_00007606 other downstream 18940 12229830 ~ 12232900 (-) False XLOC_003980
TCONS_00007605 other downstream 30654 12220890 ~ 12221186 (-) True XLOC_003979
TCONS_00007593 other downstream 82186 12169361 ~ 12169654 (-) True XLOC_003974
TCONS_00007592 other downstream 83542 12168002 ~ 12168298 (-) True XLOC_003973
TCONS_00007590 other downstream 89885 12161658 ~ 12161955 (-) True XLOC_003971
TCONS_00007611 other upstream 1022 12253860 ~ 12254156 (-) True XLOC_003983
TCONS_00007613 other upstream 36534 12289372 ~ 12289668 (-) True XLOC_003985
TCONS_00007616 other upstream 70792 12323630 ~ 12323926 (-) True XLOC_003988
TCONS_00007621 other upstream 98421 12351259 ~ 12351555 (-) True XLOC_003991
TCONS_00007628 other upstream 142680 12395518 ~ 12395814 (-) True XLOC_003995