RNA id: TCONS_00007364


Basic Information

Item Value
RNA id TCONS_00007364
length 1961
RNA type mRNA
GC content 0.41
exon number 6
gene id XLOC_003834
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 2691243 ~ 2700397 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTAACAGCAATAATACACTATTTTGAAGTTAGCAAAGGAGATCAATAAGACTGCTAACGCGGCTTCATAACGCCTATTTCATATCTagacaaacatttttattcagaaaGAAGTAAGTTACGTTATAAACGTTTACAGTGAAGATGAAGTTAAAAGCAGCTGCGGACATTGTGTTACTCAGGTACATCTAATGGCATTACAGCGGCGGAGCAACAGGTTTACCTTTAAGAGTCTCTCTGTGCTGATTTCTGCACTCCAGCATGCTGTTATATTACCAGACACAGGTTATTTCACAAAGAATGGCGCACAAGGACCAGAGAAAAGAGAgcttcagcagtgtgttttatcAGACCAATGAAGGCCAAGACGGTCTGATCCGTCCGAAGAAACTGACCAACCCAGTGCTGGAGTCCTGCAGCCGGAGAGGATTACACCGTGAGCTCATCATCAGCCACAGATGTGGTCTTCTGCCTGAAGAGAAGCCGGAGCTGAAGCGAGTGCTGGAACATAGGAGACTGGAGCAAAACAGAGACCAAGAACAAGCCTCACAGTCGCCGTCTGACCTGGAGAAAGAGCTGAGCAAGAGACGCCAGATACTGCAGGCGTATGAGCAAGAAGAGCTGAGACGCAGAGAGGACCTACGAAACATGCCGGAGTTTGTTCGAGTGCGAGAGAACCTGAGGCACATCAGCATCACAGGCTACTGAATCCACGATCATGATCCATTTCCTCAAAGCGCTTCTATAAGGAACTGATTTTTGTGACTCACTGTCAAAATTGTGTTCAGTCCACATGAaataataaagtgcaaaaaaaaaacttttcaatcaCCATTCTGGGGGAACACGGcagctaagtggttagcactatcgcctcacagcaagaaggttgctggttcgagtcccagctgggtcagttggcatttctgtgtggagtttgcatgttctccccgtgttggcgtgggtttcctctgtgtgctctggtttgccccacagtccaaacacatgcgctataggggaattgaataaactaaattgtctgtagtgtatgagtgtgtatgaatgtttcccagtactggaagggaattcgctgtttaaaacatatgctggataagttggcggttcattccgctgtggcgaccccagattaataaagggactaagccgaaggaaattgaatgaaggaatgaacagTCAGTCAATGCTATCTGGCCCTAGTCATGAGCAAGTGTTTCTTTAGGAACTaacattatacagtatttttatgttgctttatttaaataagttaataaagtttttctttattaagtttaacttaatattattagtcaattagattattaaagttgagatgactaaaaaATCAGaagatttaaagggcacatatgataaaaaaattgacttttgtaagctgtttggacagaactgggCTATAGTATGTGCTCTGTCCTATTAGAGTGATAGAAACACTACAAGTCTCGTTTAATagaatttcctgacattaaaataggatccaaatatCAGTGaatttgaggcccaccacaacacgATGTAGGAGTGCGTTTttttccctgcccaccaaatCGATTGGCAGACGctatgtttctataataacatgtatacatggccacagaacatttttgttcagcaaatAAACTGGGATCAAAATATCTGTTGAACTCTCTGTGATTTacgttttataagtttaaaacgtttttaaaaccgagcatgtttgtaataaagacgcTGGTATTaaaatacaagatgtgcagcacctgaaactactgATACTGGAAGCCTTtactggcatttctcctgcggtgttgctatcagtgtgtgaagagtgggagaagaggcttgcattgacaatccaacacaatgggcagcacaatgaacacattttataagtgatcagaaacttgtaaataactcatgaaagaataaagttacgttaaaaccaa

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-141215-39 No description available

Ensembl:

ensembl_id ENSDART00000082511

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007363 lncRNA downstream 63106 2625032 ~ 2628137 (-) True XLOC_003833
TCONS_00008442 lncRNA downstream 242729 2446641 ~ 2448514 (-) True XLOC_003826
TCONS_00008735 lncRNA downstream 375030 2315496 ~ 2316213 (-) True XLOC_003825
TCONS_00008441 lncRNA downstream 470980 2211065 ~ 2220263 (-) False XLOC_003821
TCONS_00008734 lncRNA downstream 770722 1915963 ~ 1920521 (-) True XLOC_003817
TCONS_00008736 lncRNA upstream 56496 2756893 ~ 2760366 (-) True XLOC_003835
TCONS_00008443 lncRNA upstream 141701 2842098 ~ 2843883 (-) True XLOC_003837
TCONS_00008737 lncRNA upstream 276206 2976603 ~ 2982381 (-) False XLOC_003838
TCONS_00008738 lncRNA upstream 276206 2976603 ~ 2982382 (-) True XLOC_003838
TCONS_00007368 lncRNA upstream 604154 3304551 ~ 3308462 (-) True XLOC_003839
TCONS_00007362 mRNA downstream 58496 2616816 ~ 2632747 (-) False XLOC_003833
TCONS_00007361 mRNA downstream 97198 2571486 ~ 2594045 (-) True XLOC_003832
TCONS_00007360 mRNA downstream 142103 2540139 ~ 2549140 (-) False XLOC_003831
TCONS_00007359 mRNA downstream 142103 2540139 ~ 2549140 (-) True XLOC_003831
TCONS_00007358 mRNA downstream 186493 2480293 ~ 2504750 (-) True XLOC_003830
TCONS_00007365 mRNA upstream 129415 2829812 ~ 2838699 (-) False XLOC_003836
TCONS_00007366 mRNA upstream 132354 2832751 ~ 2837156 (-) True XLOC_003836
TCONS_00007367 mRNA upstream 600880 3301277 ~ 3308569 (-) False XLOC_003839
TCONS_00007369 mRNA upstream 620201 3320598 ~ 3334248 (-) False XLOC_003840
TCONS_00007370 mRNA upstream 620726 3321123 ~ 3334250 (-) True XLOC_003840
TCONS_00007330 other downstream 1602728 1069406 ~ 1088515 (-) False XLOC_003806
TCONS_00007326 other downstream 1711495 923795 ~ 979748 (-) True XLOC_003803
TCONS_00007304 other downstream 2231313 459815 ~ 459930 (-) True XLOC_003793
TCONS_00007296 other downstream 2339542 349113 ~ 351701 (-) True XLOC_003787
TCONS_00007400 other upstream 1253326 3953723 ~ 3953837 (-) True XLOC_003853
TCONS_00007438 other upstream 3371563 6071960 ~ 6072066 (-) True XLOC_003881
TCONS_00007441 other upstream 3496879 6197276 ~ 6206589 (-) False XLOC_003884
TCONS_00007456 other upstream 4080311 6780708 ~ 6782076 (-) True XLOC_003894
TCONS_00007463 other upstream 4243903 6944300 ~ 6948018 (-) False XLOC_003898

Expression Profile

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