RNA id: TCONS_00007406


Basic Information

Item Value
RNA id TCONS_00007406
length 447
RNA type mRNA
GC content 0.33
exon number 26
gene id XLOC_003856
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 4038040 ~ 4137242 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

aaatttggagaggatcaaccaaatgccaaaaaaaaacaagcaaacatgGAAACTGTGATacgttttaaaaaaatacttggagagacaacttTTTCTGaagtgAAACTGTCAGAGGAAGAGAGATcgaaaaaactagtggccttaaaatgcatAACACCAAAGCCTATTGAAGCCAAGgagcgaTtaatacatCACAATCTTGCGTTACTTCATAAAAAGAGAGattcaaatataatcaacaGGAAAGATAAatttgaaggcaaaaGTCACAAttatttggtttttcagGTTATTGTAAATGGGCCattatttaaaggtgctgtatCCAAAGGTTATTATCAGACAAGAAaaGATGCGAccaaaataaaacaacccattttaaCATTACGCACATACACGCATGATATTGCAGacatTCAccgagacttacaaataaacaatatttta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000184669

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007403 lncRNA downstream 50231 3983995 ~ 3987809 (-) True XLOC_003854
TCONS_00007402 lncRNA downstream 53559 3974943 ~ 3984481 (-) False XLOC_003854
TCONS_00007389 lncRNA downstream 408852 3625121 ~ 3629188 (-) True XLOC_003848
TCONS_00007386 lncRNA downstream 433213 3602180 ~ 3604827 (-) True XLOC_003847
TCONS_00008740 lncRNA downstream 485973 3550371 ~ 3552067 (-) True XLOC_003845
TCONS_00007408 lncRNA upstream 49780 4187022 ~ 4194697 (-) True XLOC_003858
TCONS_00008444 lncRNA upstream 126806 4264048 ~ 4281694 (-) True XLOC_003860
TCONS_00007412 lncRNA upstream 149388 4286630 ~ 4290096 (-) True XLOC_003862
TCONS_00007421 lncRNA upstream 161849 4299091 ~ 4302567 (-) True XLOC_003864
TCONS_00008742 lncRNA upstream 172034 4309276 ~ 4350341 (-) False XLOC_003865
TCONS_00007404 mRNA downstream 13953 3991911 ~ 4024087 (-) False XLOC_003855
TCONS_00007405 mRNA downstream 14100 3994747 ~ 4023940 (-) True XLOC_003855
TCONS_00007401 mRNA downstream 50155 3971716 ~ 3987885 (-) False XLOC_003854
TCONS_00007398 mRNA downstream 78151 3909756 ~ 3959889 (-) False XLOC_003852
TCONS_00007397 mRNA downstream 78563 3909756 ~ 3959477 (-) False XLOC_003852
TCONS_00007407 mRNA upstream 11566 4148808 ~ 4175773 (-) True XLOC_003857
TCONS_00007409 mRNA upstream 68325 4205567 ~ 4235811 (-) False XLOC_003859
TCONS_00007410 mRNA upstream 68654 4205896 ~ 4220167 (-) True XLOC_003859
TCONS_00007411 mRNA upstream 145772 4283014 ~ 4286010 (-) True XLOC_003861
TCONS_00007413 mRNA upstream 156046 4293288 ~ 4300831 (-) False XLOC_003863
TCONS_00007400 other downstream 84203 3953723 ~ 3953837 (-) True XLOC_003853
TCONS_00007330 other downstream 2949525 1069406 ~ 1088515 (-) False XLOC_003806
TCONS_00007326 other downstream 3058292 923795 ~ 979748 (-) True XLOC_003803
TCONS_00007304 other downstream 3578110 459815 ~ 459930 (-) True XLOC_003793
TCONS_00007296 other downstream 3686339 349113 ~ 351701 (-) True XLOC_003787
TCONS_00007438 other upstream 1934718 6071960 ~ 6072066 (-) True XLOC_003881
TCONS_00007441 other upstream 2060034 6197276 ~ 6206589 (-) False XLOC_003884
TCONS_00007456 other upstream 2643466 6780708 ~ 6782076 (-) True XLOC_003894
TCONS_00007463 other upstream 2807058 6944300 ~ 6948018 (-) False XLOC_003898
TCONS_00007477 other upstream 2979005 7116247 ~ 7116363 (-) True XLOC_003904