Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU444357 |
| length | 293 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G375238 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 13035210 ~ 13035502 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0035622 | intrahepatic bile duct development | biological_process |
| GO:0061009 | common bile duct development | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU444228 | lncRNA | upstream | 293263 | 12741736 ~ 12741947 (+) | True | G375120 |
| TU444157 | lncRNA | upstream | 403980 | 12629553 ~ 12631230 (+) | True | G375053 |
| TU444156 | lncRNA | upstream | 406867 | 12628106 ~ 12628343 (+) | True | G375052 |
| TU444155 | lncRNA | upstream | 408978 | 12624928 ~ 12626232 (+) | True | G375051 |
| TU444073 | lncRNA | upstream | 500911 | 12533805 ~ 12534299 (+) | True | G374985 |
| TU444368 | lncRNA | downstream | 58720 | 13094222 ~ 13094421 (+) | True | G375249 |
| XR_004577343.1 | lncRNA | downstream | 74812 | 13110314 ~ 13115156 (+) | True | LOC117596171 |
| TU444391 | lncRNA | downstream | 285771 | 13321273 ~ 13322869 (+) | True | G375270 |
| TU444590 | lncRNA | downstream | 401145 | 13436647 ~ 13437057 (+) | True | G375422 |
| TU444602 | lncRNA | downstream | 440974 | 13476476 ~ 13478259 (+) | True | G375431 |
| XM_026932267.2 | mRNA | upstream | 45115 | 12909822 ~ 12990095 (+) | True | nlgn4xa |
| XM_026932268.2 | mRNA | upstream | 46836 | 12909822 ~ 12988374 (+) | False | nlgn4xa |
| XM_026932270.2 | mRNA | upstream | 46836 | 12909822 ~ 12988374 (+) | False | nlgn4xa |
| XM_026931727.2 | mRNA | upstream | 185013 | 12825950 ~ 12850197 (+) | True | pudp |
| XM_026932252.2 | mRNA | upstream | 296547 | 12726500 ~ 12738663 (+) | True | sts |
| XM_026932122.2 | mRNA | downstream | 198382 | 13233884 ~ 13270417 (+) | True | prkx |
| XM_026932116.2 | mRNA | downstream | 253324 | 13288826 ~ 13302116 (+) | True | mxra5a |
| XM_026932117.2 | mRNA | downstream | 253324 | 13288826 ~ 13302116 (+) | False | mxra5a |
| XM_026932368.2 | mRNA | downstream | 318423 | 13353925 ~ 13394780 (+) | True | dhrsx |
| XM_026932366.2 | mRNA | downstream | 326140 | 13361642 ~ 13394780 (+) | False | dhrsx |
| TU442901 | other | upstream | 2025590 | 11006008 ~ 11009620 (+) | True | G373955 |
| TU442162 | other | upstream | 3158657 | 9839096 ~ 9876553 (+) | True | LOC117596102 |
| TU441073 | other | upstream | 4881355 | 8149960 ~ 8153855 (+) | True | G372351 |
| XR_003403794.1 | other | upstream | 6316384 | 6718694 ~ 6718826 (+) | True | LOC113537770 |
| XR_003403795.1 | other | upstream | 7827479 | 5207595 ~ 5207731 (+) | True | LOC113537771 |
| XR_004577362.1 | other | downstream | 981021 | 14016523 ~ 14021131 (+) | False | gpalpp1 |
| TU444908 | other | downstream | 987748 | 14023250 ~ 14042614 (+) | False | G375711 |
| TU445701 | other | downstream | 2044238 | 15079740 ~ 15091481 (+) | False | rfx1b |
| TU445724 | other | downstream | 2078970 | 15114472 ~ 15116856 (+) | False | smdt1b |
| trnaq-cug_18 | other | downstream | 2313752 | 15349254 ~ 15349325 (+) | True | trnaq-cug_18 |
