TISSUE / ORGAN: embryo

CELL TYPE

MARKER

DATASET LIST

Dataset ID Species Tissue / Organ Experiment type Sample Source dataset ID Project ID
1. GSE173972 (WT, ezh1+|+) Danio rerio embryo baseline 1.25dpf, Kdrl-positive embryos GSM5283739 GSE173972
2. GSE173972 (HET, ezh1+|-) Danio rerio embryo hematopoietic 1.25dpf, Kdrl-positive embryos GSM5283741 GSE173972
3. GSE173972 (KO, ezh1-|-) Danio rerio embryo hematopoietic 1.25dpf, Kdrl-positive embryos GSM5283743 GSE173972
4. GSE158849 (labeled) Danio rerio embryo baseline 6hpf, WT, 4sUTP injected (labeled) GSM4812182 GSE158849
5. GSE158849 (unlabeled) Danio rerio embryo baseline 6hpf, WT, 4sUTP injected (unlabeled) GSM4812182 GSE158849
6. GSE106587 (WT) Danio rerio embryo baseline 12hpf, 6 somites, wild-type TLAB embryo GSM3084402 GSE106587
7. GSE106587 (MZoep mutant) Danio rerio embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo GSM3084403 GSE106587
8. GSE126647 (control) Danio rerio embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells GSM3610370 GSE126647
9. GSE126647 (Pbx4-depleted) Danio rerio embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells GSM3610371 GSE126647
10. PRJNA734348 (dome, control) Danio rerio embryo baseline 4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) SRR14703452 PRJNA734348
11. PRJNA734348 (dome, dnmt1) Danio rerio embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) SRR14703458 PRJNA734348
12. PRJNA734348 (shield, control) Danio rerio embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) SRR14703469 PRJNA734348
13. PRJNA734348 (shield, dnmt1) Danio rerio embryo growth 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) SRR14703474 PRJNA734348
14. PRJNA656271 (24hpf) Danio rerio embryo baseline 24hpf, FACS-isolated EGFP+ cells SRR12424272 PRJNA656271
15. PRJNA656271 (1.5dpf) Danio rerio embryo baseline 1.5dpf, FACS-isolated EGFP+ cells SRR12424276 PRJNA656271
16. PRJNA656271 (2dpf) Danio rerio embryo baseline 2dpf, FACS-isolated EGFP+ cells SRR12424278 PRJNA656271
17. GSE168695 (5dpf) Danio rerio embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos GSM5158857 GSE168695
18. PRJNA640816 (2dpf) Danio rerio embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells SRR12060552 PRJNA640816
19. PRJNA640816 (2.9dpf) Danio rerio embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells SRR12060555 PRJNA640816
20. PRJNA706197 (12hpf) Danio rerio embryo baseline 12hpf, FACS sorted sox10:nEOS cells SRR13839954 PRJNA706197
21. PRJNA706197 (14hpf) Danio rerio embryo baseline 14hpf, FACS sorted sox10:nEOS cells SRR13839958 PRJNA706197
22. PRJNA706197 (20hpf) Danio rerio embryo baseline 20hpf, FACS sorted sox10:nEOS cells SRR13839965 PRJNA706197
23. PRJNA706197 (24hpf) Danio rerio embryo baseline 24hpf, FACS sorted sox10:nEOS cells SRR13839972 PRJNA706197
24. PRJNA706197 (1.25dpf) Danio rerio embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells SRR13839973 PRJNA706197
25. PRJNA706197 (18hpf) Danio rerio embryo baseline 18hpf, FACS sorted sox10:nEOS cells SRR13839979 PRJNA706197
26. PRJNA564810 (5dpf) Danio rerio embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development SRR10095964 PRJNA564810
27. PRJNA564810 (2dpf) Danio rerio embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development SRR10095966 PRJNA564810
28. PRJNA564810 (1dpf) Danio rerio embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development SRR10095968 PRJNA564810
29. PRJNA797645 Gasterosteus aculeatus embryo baseline 70 hpf, whole embryo, untreatment SRR17665713 PRJNA797645