RNA id: CI01000030_08350086_08366927.mRNA



Basic Information


Item Value
RNA id CI01000030_08350086_08366927.mRNA
length 1311
RNA type mRNA
GC content 0.44
exon number 6
gene id CI01000030_08350086_08366927
representative True

Chromosome Information


Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8349698 ~ 8367079 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAGCCTATCCGTGACCCGGCAAAGGTCATGACACCAAAACCAAATCCACACAATAGCAAAGAAGAAGCAGTGTCTTTACTGACTGTCCCATCGCCTGAAGTCTCAGCGTTTCTGGAGAATTCAGAAAGAGAGCGGATGCTGGCAGATTCACAATGGCTGCCTTCAAATGGTCACAGTCAGTGTGTGTGTTTGGTGACACAGATGAAGTGAAGTCAGTGTCAGTGATGGAGGGAGATTCTGTCACTGTACAGACTGATTTTACTGAAGTACAGAGAGATGATCATATACTGTGGACGTTTGGACCTCGAGGGACTCGCATAGCTGAAATTCACAGACAGAATATCTATATAGATGCCACTGGTACAACATTTGAGAAAATACTCCAGATAGACAATCAAACTGGATCTCTGATCATCAGAAACATCAGAACTGAACACACTGGACTTTATAAACTAACAATCTTCAGCAACAGAGGAACTTCAAACCAGAGATTCAGTGTGACTGTCTATGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAACATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAACAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACCAAACATCTGGACAACATCACTCAACTCTGTCACACATGTTCAGAACAACGTTCAAGTTTCATGATGGCCACAGCTCTTATAGCGCCGCTGCTGCTGGTGGTCATAGCTGTAGTTGCAGATCTGAAAATCACAGAGTCTGAATACACACAGATCATCTACTGTCTTCAGATGGGAGATCTGCCACAGAAATCATTGCTGGATGTGGGCAGAACAGAGACAGCTGTGAACTATCAACACATTCAGTGAAGACTAATATTGTGTATCAAAATATTGTTTATCTGTTGCCTGAAAACATTAGCATAAATCGAGACTCATCAGACCAGGCAACGTTTTTACAATCTTCTATTGTCTAGTGTTGGTGAGTCTGTGTGAACTGTAGCCTCAGTTTGCTGTTCTCAGCTGACAGGAGTGACACCGGTGTTTCTGCTGCTGCTGTAGATCATCTGCTTCAAGGTTGGACGTGTTGTGCGTTCAGAGATGCTCTTCTGCAGACCTCGGTTGTAACGAGTGCTTATTTGAGTTGGTTGTGACTCCAGAGTGTGATGTTGGAGTTGATGGTGAAGCTGGAGGTTCATTGCTGAAATTTCACTTTGTTGAAACTCTCAGTTTGAAATTCTCAGGCAGCATGAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU185791 lncRNA downstream 4440 8345049 ~ 8345258 (-) True CI01000030_08335819_08343892
TU185780 lncRNA downstream 38566 8310901 ~ 8311132 (-) True G163528
TU185772 lncRNA downstream 65216 8284251 ~ 8284482 (-) True G163520
TU185770 lncRNA downstream 70683 8278807 ~ 8279015 (-) True G163518
TU185766 lncRNA downstream 80507 8268910 ~ 8269191 (-) True G163514
TU185800 lncRNA upstream 7706 8374785 ~ 8375063 (-) True G163543
TU185801 lncRNA upstream 37921 8405000 ~ 8405234 (-) True G163544
TU185806 lncRNA upstream 57551 8424630 ~ 8424891 (-) True G163549
TU185657 lncRNA upstream 62873 8429952 ~ 8432173 (-) True G163409
TU185651 lncRNA upstream 96698 8463777 ~ 8466289 (-) True G163403
CI01000030_08335819_08343892.mRNA mRNA downstream 3800 8335563 ~ 8345898 (-) False CI01000030_08335819_08343892
CI01000030_08328834_08331465.mRNA mRNA downstream 18158 8328102 ~ 8331540 (-) True CI01000030_08328834_08331465
CI01000030_08232550_08241049.mRNA mRNA downstream 108649 8232101 ~ 8241049 (-) True CI01000030_08232550_08241049
CI01000030_08201019_08203601.mRNA mRNA downstream 146053 8200166 ~ 8203645 (-) True CI01000030_08201019_08203601
CI01000030_08185866_08194632.mRNA mRNA downstream 152432 8184897 ~ 8197266 (-) False CI01000030_08185866_08194632
CI01000030_08367669_08379327.mRNA mRNA upstream 273 8367352 ~ 8380882 (-) True CI01000030_08367669_08379327
CI01000030_08393024_08396689.mRNA mRNA upstream 24910 8391989 ~ 8396748 (-) True CI01000030_08393024_08396689
CI01000030_08399321_08402641.mRNA mRNA upstream 32084 8399163 ~ 8402924 (-) True CI01000030_08399321_08402641
CI01000030_08440613_08441821.mRNA mRNA upstream 73465 8440544 ~ 8441836 (-) True CI01000030_08440613_08441821
CI01000030_08450632_08457703.mRNA mRNA upstream 83097 8450176 ~ 8457975 (-) True CI01000030_08450632_08457703
TU185749 other downstream 157212 8192404 ~ 8192486 (-) True G163498
TU185614 other downstream 557316 7792243 ~ 7792382 (-) True G163366
TU185612 other downstream 611694 7737975 ~ 7738004 (-) True G163364
TU185332 other downstream 1199554 7149474 ~ 7150144 (-) True G163139
TU185223 other downstream 1424041 6924483 ~ 6925657 (-) True G163065
TU186160 other upstream 566334 8933413 ~ 8933982 (-) True G163873
TU185995 other upstream 920127 9287206 ~ 9302149 (-) True G163710
TU186385 other upstream 1108109 9475188 ~ 9476264 (-) True G164071
TU186002 other upstream 1748436 10121592 ~ 10121720 (-) True G163717
TU186048 other upstream 1918650 10318595 ~ 10320105 (-) True CI01000030_10313822_10320039

Expression Profile