RNA id: AMCG00010287


Basic Information

Item Value
RNA id AMCG00010287
length 570
RNA type mRNA
GC content 0.48
exon number 4
gene id AMCG00010287
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 22859678 ~ 22869451 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTCAGGCACCGGGGCATTCTGGGGGCTCTCTCCTCGGGGATAAATCGCTGGAGTTCTACCGAGACCCGGTGACCTTCTGCGGCCGCCGGATCAAGAAGCATGGAAGCCGGGTTTTTCAGGCACGACTGCTCAACAAGTCcacattgtttgtgtgttcagtCCAGGGGATGAAAGAATTACTGTGTGGGATTATTTCTGCACCTGTTAATATCAAAGTACCTATGTGGTCCTCTGGATTCTCTACTGCACTGGAGGCCAAGGAGAAGCTGCTTAAAATTATTCATGAGAGAATGTTGTGTGAACAGAATGGgttTCTTGGGAAACTCAGATGTGCACCTTTCCCAGAGAAAAGCAGTGCTTCACAACACCTTCTGCTGTTTATTTCAGCATTGATTCCAAAAGCTTTGGCATCTCTCCTCACTTCTTTTACACTAGCTCTTTCCGGTCCTAGTAAGGAATGTATTCGAAGTCGCGCAAGGAGGGATCTTGAATATCTGACCCACGTGTTGCTGGAAGTTCAGAGATTGTGGCCTCCTTTTGTTGGTGGGTGCAGAATAGCAAATGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99134 lncRNA downstream 124238 22734995 ~ 22735440 (-) True G79483
TU99106 lncRNA downstream 164719 22681665 ~ 22694959 (-) True G79466
TU99051 lncRNA downstream 476548 22380734 ~ 22383130 (-) True G79430
TU99042 lncRNA downstream 551358 22308118 ~ 22308320 (-) True G79424
TU99019 lncRNA downstream 760890 22096838 ~ 22098788 (-) True G79407
TU99199 lncRNA upstream 227151 23096602 ~ 23097308 (-) True G79541
TU99200 lncRNA upstream 239402 23108853 ~ 23109092 (-) True G79542
TU99206 lncRNA upstream 271934 23141385 ~ 23145055 (-) False G79548
TU99207 lncRNA upstream 271934 23141385 ~ 23147069 (-) True G79548
TU99264 lncRNA upstream 457537 23326988 ~ 23327361 (-) True G79594
AMCG00010280 mRNA downstream 151289 22699738 ~ 22708389 (-) True AMCG00010280
AMCG00010277 mRNA downstream 329136 22452189 ~ 22530542 (-) True AMCG00010277
AMCG00010276 mRNA downstream 416149 22436424 ~ 22443529 (-) True AMCG00010276
AMCG00010275 mRNA downstream 427405 22428369 ~ 22432273 (-) True AMCG00010275
AMCG00010274 mRNA downstream 497824 22357982 ~ 22361854 (-) True AMCG00010274
AMCG00010286 mRNA upstream 117956 22987407 ~ 22996441 (-) True AMCG00010286
AMCG00010284 mRNA upstream 133564 23003015 ~ 23005446 (-) True AMCG00010284
AMCG00010285 mRNA upstream 174603 23044054 ~ 23047441 (-) True AMCG00010285
AMCG00010288 mRNA upstream 213204 23082655 ~ 23086345 (-) True AMCG00010288
AMCG00010289 mRNA upstream 235409 23104860 ~ 23105966 (-) True AMCG00010289
TU98958 other downstream 877704 21964529 ~ 21981974 (-) True AMCG00010271
TU98765 other downstream 1777853 21075941 ~ 21081825 (-) False AMCG00010247
TU98705 other downstream 1918285 20931171 ~ 20941393 (-) True G79147
TU98072 other downstream 4913917 17945235 ~ 17945761 (-) True G78610
TU98067 other downstream 5003948 17852867 ~ 17855730 (-) False AMCG00010190
TU99198 other upstream 213395 23082846 ~ 23085985 (-) False AMCG00010288
TU99273 other upstream 490192 23359643 ~ 23364947 (-) True G79601
TU99963 other upstream 3503291 26372742 ~ 26379747 (-) True AMCG00010364
TU101107 other upstream 9084933 31954384 ~ 31971755 (-) True AMCG00010487
TU101338 other upstream 10125999 32995450 ~ 32999999 (-) False AMCG00010509

Expression Profile