Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU442943 |
| length | 384 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G373982 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 11135553 ~ 11135936 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU442932 | lncRNA | upstream | 44448 | 11070122 ~ 11091105 (+) | True | G373975 |
| TU442930 | lncRNA | upstream | 71518 | 11062016 ~ 11064035 (+) | False | LOC113537724 |
| TU442882 | lncRNA | upstream | 170398 | 10961739 ~ 10965155 (+) | True | G373939 |
| TU442877 | lncRNA | upstream | 184073 | 10948931 ~ 10951480 (+) | True | G373934 |
| TU442861 | lncRNA | upstream | 201750 | 10929744 ~ 10933803 (+) | True | LOC113537644 |
| TU442959 | lncRNA | downstream | 143880 | 11279816 ~ 11280114 (+) | True | G373997 |
| TU443267 | lncRNA | downstream | 272319 | 11408255 ~ 11409661 (+) | True | G374262 |
| TU443302 | lncRNA | downstream | 336763 | 11472699 ~ 11472973 (+) | True | G374293 |
| TU443305 | lncRNA | downstream | 359169 | 11495105 ~ 11495467 (+) | True | G374296 |
| TU443308 | lncRNA | downstream | 378415 | 11514351 ~ 11515525 (+) | True | G374299 |
| XM_026931817.2 | mRNA | upstream | 6038 | 11084542 ~ 11129515 (+) | False | atf7ip |
| XM_026931816.2 | mRNA | upstream | 6038 | 11084544 ~ 11129515 (+) | False | atf7ip |
| XM_026931815.2 | mRNA | upstream | 6038 | 11119269 ~ 11129515 (+) | False | atf7ip |
| XM_034300179.1 | mRNA | upstream | 6038 | 11119435 ~ 11129515 (+) | False | atf7ip |
| XM_034300175.1 | mRNA | upstream | 6039 | 11084548 ~ 11129514 (+) | True | atf7ip |
| XM_034300349.1 | mRNA | downstream | 3453 | 11139389 ~ 11241579 (+) | False | grin2bb |
| XM_026932271.2 | mRNA | downstream | 3453 | 11139389 ~ 11241579 (+) | True | grin2bb |
| XM_026932273.2 | mRNA | downstream | 10850 | 11146786 ~ 11241579 (+) | False | grin2bb |
| XM_026932272.2 | mRNA | downstream | 10863 | 11146799 ~ 11241579 (+) | False | grin2bb |
| XM_026932274.2 | mRNA | downstream | 10904 | 11146840 ~ 11241579 (+) | False | grin2bb |
| TU442901 | other | upstream | 125933 | 11006008 ~ 11009620 (+) | True | G373955 |
| TU442162 | other | upstream | 1259000 | 9839096 ~ 9876553 (+) | True | LOC117596102 |
| TU441073 | other | upstream | 2981698 | 8149960 ~ 8153855 (+) | True | G372351 |
| XR_003403794.1 | other | upstream | 4416727 | 6718694 ~ 6718826 (+) | True | LOC113537770 |
| XR_003403795.1 | other | upstream | 5927822 | 5207595 ~ 5207731 (+) | True | LOC113537771 |
| XR_004577362.1 | other | downstream | 2880587 | 14016523 ~ 14021131 (+) | False | gpalpp1 |
| TU444908 | other | downstream | 2887314 | 14023250 ~ 14042614 (+) | False | G375711 |
| TU445701 | other | downstream | 3943804 | 15079740 ~ 15091481 (+) | False | rfx1b |
| TU445724 | other | downstream | 3978536 | 15114472 ~ 15116856 (+) | False | smdt1b |
| trnaq-cug_18 | other | downstream | 4213318 | 15349254 ~ 15349325 (+) | True | trnaq-cug_18 |
