GENE ID: ENSDARG00000099014

Symbol Location Gene type Genome version Species
fxyd1 16: 45202602 ~ 45225520 (-) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Granule cells (cluster: 14)
Endothelium (cluster: 17)
 potential marker
potential marker
 NA
NA
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Radial glia (cluster: 8)
 potential marker
 NA
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Chondrocytes (cluster: 4)
 potential marker
 NA
GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Glia (cluster: 16)
Epithelial cells (cluster: 6)
Cornea (cluster: 9)
 potential marker
potential marker
potential marker
 NA
NA
NA
GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Glia (cluster: 7)
 potential marker
 NA
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Fibroblasts (cluster: 16)
Epidermal cells (cluster: 9)
 potential marker
potential marker
 NA
NA
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Fibroblasts (cluster: 14)
Neuron (cluster: 17)
Myeloid cells (cluster: 7)
 potential marker
potential marker
potential marker
 NA
NA
NA
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Osteoblast (cluster: 6)
 potential marker
 NA
GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry Epidermal cells (cluster: 1)
 potential marker
 NA
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
 potential marker
 NA
GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Placode (cluster: 15)
 potential marker
 NA
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Ionocyte progenitors (cluster: 6)
Ionocyte progenitors (cluster: 8)
 potential marker
potential marker
 NA
NA
PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells Neural crest (cluster: 6)
Pigment cells (cluster: 7)
 potential marker
potential marker
 NA
NA
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells Pigment cells (cluster: 5)
 potential marker
 NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Enteric smooth muscle (cluster: 23)
Chondrocytes (cluster: 6)
 potential marker
potential marker
 NA
NA
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 13)
Epidermal cells (cluster: 15)
Skeletal muscle cells (cluster: 20)
Cranial neural crest (cluster: 27)
Chondrocytes (cluster: 5)
 potential marker
potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 14)
Skeletal muscle cells (cluster: 19)
Floor plate (cluster: 23)
Mucous secreting cells (cluster: 24)
 potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Neutrophils (cluster: 8)
 potential marker
 NA
GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Prechordal plate,polsterq (cluster: 14)
 potential marker
 NA
GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Floor plate (cluster: 13)
Placode (cluster: 14)
 potential marker
potential marker
 NA
NA
GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Prechordal plate,polster (cluster: 15)
Mesoderm (cluster: 8)
 potential marker
potential marker
 NA
NA
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Mesoderm (cluster: 10)
 potential marker
 NA
GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Periderm cells (cluster: 11)
 potential marker
 NA
GSE158142 (24hpf) head baseline 24hpf, untreatment Periderm cells (cluster: 8)
 potential marker
 NA
GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Chondrocytes (cluster: 7)
 potential marker
 NA
PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Heart primordium (cluster: 2)
 potential marker
 NA
PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Heart primordium (cluster: 2)
 potential marker
 NA
PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury
PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Heart primordium (cluster: 5)
 potential marker
 NA
PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury Heart primordium (cluster: 4)
 potential marker
 NA
PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood Cardiomyocytes (cluster: 1)
 potential marker
 NA
PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Endothelium (cluster: 9)
 potential marker
 NA
GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Smooth muscle cells (cluster: 3)
 potential marker
 NA
GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS Smooth muscle cells (cluster: 3)
 potential marker
 NA
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae Support cells (cluster: 2)
 potential marker
 NA
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae Hair cells (cluster: 5)
 potential marker
 NA
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Ciliated olfactory sensory neuron (cluster: 5)
Microvillus olfactory sensory neuron (cluster: 8)
 potential marker
potential marker
 NA
NA
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Microvillus olfactory sensory neuron (cluster: 5)
Neuron (cluster: 6)
 potential marker
potential marker
 NA
NA
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Microvillus olfactory sensory neuron (cluster: 3)
Neuron (cluster: 5)
 potential marker
potential marker
 NA
NA
GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 Corticotropes (cluster: 3)
 potential marker
 NA
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis Corticotropes (cluster: 5)
Gonadotrope (cluster: 6)
Melanophores (cluster: 7)
 potential marker
potential marker
potential marker
 NA
NA
NA
PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Pancreas endocrine cells (cluster: 1)
 potential marker
 NA
GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment Floor plate (cluster: 13)
 potential marker
 NA
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Neuron (cluster: 15)
Melanophores (cluster: 6)
Iridophore (cluster: 9)
 potential marker
potential marker
potential marker
 NA
NA
NA
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Smooth muscle cells (cluster: 11)
Chondrocytes (cluster: 16)
Pronephros (cluster: 28)
Chondrocranium cells (cluster: 35)
Chondrocranium cells (cluster: 8)
 potential marker
potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
NA
GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 8)
 potential marker
 NA
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT Macrophages (cluster: 7)
 potential marker
 NA
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Macrophages (cluster: 7)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 7)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 10)
 potential marker
 NA
GSE151354 (wild type) cartilage baseline 21dpf, wild type
GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
GSE158142 (2dpf) head baseline 2dpf, untreatment
GSE158142 (3dpf) head baseline 3dpf, untreatment
PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured
PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated
GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC
GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih
GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture
GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors
PRJNA641144 (C_PRO) tumor disease adult, ZMEL1-PRO cells in vitro co-culture
PRJNA641144 (D_INV) tumor disease adult, ZMEL1-INV cells in vitro individual culture
PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors
PRJNA641144 (D_PRO) tumor disease adult, ZMEL1-PRO cells in vitro individual culture
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT

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