Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000346 |
| length | 1231 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 8 |
| gene id | XLOC_000206 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 15204633 ~ 15224338 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005575 | cellular_component | cellular_component |
| GO:0042834 | peptidoglycan binding | molecular_function |
| GO:0030246 | carbohydrate binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060929-564 | Enables carbohydrate binding activity and peptidoglycan binding activity. Predicted to be active in extracellular space. Is expressed in several structures, including digestive system; eye; heart; integument; and pleuroperitoneal region. |
| ensembl_id | ENSDART00000121868 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00002820 | lncRNA | upstream | 142995 | 15073400 ~ 15073664 (+) | True | XLOC_000204 |
| TCONS_00003049 | lncRNA | upstream | 195237 | 14851622 ~ 15021422 (+) | True | XLOC_000203 |
| TCONS_00003047 | lncRNA | upstream | 446005 | 14769501 ~ 14770654 (+) | False | XLOC_000202 |
| TCONS_00003048 | lncRNA | upstream | 446005 | 14769607 ~ 14770654 (+) | True | XLOC_000202 |
| TCONS_00002819 | lncRNA | upstream | 606779 | 14607834 ~ 14609880 (+) | True | XLOC_000190 |
| TCONS_00003050 | lncRNA | downstream | 198675 | 15422226 ~ 15436325 (+) | True | XLOC_000209 |
| TCONS_00003051 | lncRNA | downstream | 1350415 | 16573966 ~ 16574929 (+) | False | XLOC_000215 |
| TCONS_00003052 | lncRNA | downstream | 1448538 | 16672089 ~ 16674126 (+) | True | XLOC_000217 |
| TCONS_00000380 | lncRNA | downstream | 2685508 | 17909059 ~ 17911739 (+) | True | XLOC_000226 |
| TCONS_00002822 | lncRNA | downstream | 2742563 | 17966114 ~ 17968446 (+) | False | XLOC_000227 |
| TCONS_00000344 | mRNA | upstream | 13302 | 15137901 ~ 15203357 (+) | True | XLOC_000205 |
| TCONS_00000333 | mRNA | upstream | 556379 | 14658801 ~ 14660280 (+) | True | XLOC_000191 |
| TCONS_00000332 | mRNA | upstream | 728585 | 14466860 ~ 14488074 (+) | True | XLOC_000189 |
| TCONS_00000331 | mRNA | upstream | 752639 | 14454663 ~ 14464020 (+) | True | XLOC_000188 |
| TCONS_00000330 | mRNA | upstream | 773757 | 14432434 ~ 14442902 (+) | True | XLOC_000187 |
| TCONS_00000348 | mRNA | downstream | 2717 | 15226268 ~ 15257315 (+) | True | XLOC_000207 |
| TCONS_00000349 | mRNA | downstream | 35090 | 15258641 ~ 15285455 (+) | True | XLOC_000208 |
| TCONS_00000350 | mRNA | downstream | 850336 | 16073887 ~ 16220234 (+) | False | XLOC_000210 |
| TCONS_00000351 | mRNA | downstream | 904274 | 16127825 ~ 16220126 (+) | False | XLOC_000210 |
| TCONS_00000352 | mRNA | downstream | 921064 | 16144615 ~ 16220235 (+) | True | XLOC_000210 |
| TCONS_00000343 | other | upstream | 448989 | 14767576 ~ 14767670 (+) | True | XLOC_000201 |
| TCONS_00000342 | other | upstream | 471920 | 14744645 ~ 14744739 (+) | True | XLOC_000200 |
| TCONS_00000341 | other | upstream | 479095 | 14737470 ~ 14737564 (+) | True | XLOC_000199 |
| TCONS_00000340 | other | upstream | 486269 | 14730296 ~ 14730390 (+) | True | XLOC_000198 |
| TCONS_00000339 | other | upstream | 493409 | 14723156 ~ 14723250 (+) | True | XLOC_000197 |
| TCONS_00000353 | other | downstream | 938553 | 16162104 ~ 16162220 (+) | True | XLOC_000211 |
| TCONS_00000357 | other | downstream | 1234974 | 16458525 ~ 16458741 (+) | True | XLOC_000213 |
| TCONS_00000364 | other | downstream | 1377147 | 16600698 ~ 16614589 (+) | True | XLOC_000215 |
| TCONS_00000367 | other | downstream | 1545132 | 16768683 ~ 16768809 (+) | True | XLOC_000218 |
| TCONS_00000369 | other | downstream | 2289964 | 17513515 ~ 17522176 (+) | True | XLOC_000219 |
