Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00007450 |
| length | 993 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | XLOC_003888 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 6349443 ~ 6386572 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| GO:0008083 | growth factor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-100427-6 | Predicted to enable glial cell-derived neurotrophic factor receptor binding activity; growth factor activity; and receptor tyrosine kinase binding activity. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in Hirschsprung's disease. Orthologous to human NRTN (neurturin). |
| ensembl_id | ENSDART00000113882 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008750 | lncRNA | downstream | 25473 | 6316654 ~ 6324557 (-) | True | XLOC_003887 |
| TCONS_00008450 | lncRNA | downstream | 71332 | 6276900 ~ 6278698 (-) | True | XLOC_003886 |
| TCONS_00007448 | lncRNA | downstream | 87321 | 6261693 ~ 6262709 (-) | True | XLOC_003885 |
| TCONS_00007445 | lncRNA | downstream | 143474 | 6204570 ~ 6206556 (-) | True | XLOC_003884 |
| TCONS_00007440 | lncRNA | downstream | 161617 | 6187382 ~ 6188413 (-) | True | XLOC_003883 |
| TCONS_00008751 | lncRNA | upstream | 75405 | 6429973 ~ 6431132 (-) | False | XLOC_003891 |
| TCONS_00008752 | lncRNA | upstream | 75405 | 6429973 ~ 6431348 (-) | True | XLOC_003891 |
| TCONS_00008753 | lncRNA | upstream | 100466 | 6455034 ~ 6456300 (-) | True | XLOC_003893 |
| TCONS_00008754 | lncRNA | upstream | 437978 | 6792546 ~ 6799938 (-) | True | XLOC_003895 |
| TCONS_00007460 | lncRNA | upstream | 514748 | 6869316 ~ 6870035 (-) | False | XLOC_003897 |
| TCONS_00007447 | mRNA | downstream | 84307 | 6261682 ~ 6265723 (-) | False | XLOC_003885 |
| TCONS_00007446 | mRNA | downstream | 84456 | 6259048 ~ 6265574 (-) | False | XLOC_003885 |
| TCONS_00007442 | mRNA | downstream | 143405 | 6197277 ~ 6206625 (-) | False | XLOC_003884 |
| TCONS_00007451 | mRNA | upstream | 56601 | 6411169 ~ 6429705 (-) | True | XLOC_003889 |
| TCONS_00007452 | mRNA | upstream | 62882 | 6417450 ~ 6420917 (-) | True | XLOC_003890 |
| TCONS_00007453 | mRNA | upstream | 91667 | 6446235 ~ 6452492 (-) | False | XLOC_003892 |
| TCONS_00007454 | mRNA | upstream | 92357 | 6446925 ~ 6452469 (-) | False | XLOC_003892 |
| TCONS_00007455 | mRNA | upstream | 92853 | 6447421 ~ 6452444 (-) | True | XLOC_003892 |
| TCONS_00007441 | other | downstream | 143441 | 6197276 ~ 6206589 (-) | False | XLOC_003884 |
| TCONS_00007438 | other | downstream | 277964 | 6071960 ~ 6072066 (-) | True | XLOC_003881 |
| TCONS_00007400 | other | downstream | 2396193 | 3953723 ~ 3953837 (-) | True | XLOC_003853 |
| TCONS_00007330 | other | downstream | 5261515 | 1069406 ~ 1088515 (-) | False | XLOC_003806 |
| TCONS_00007326 | other | downstream | 5370282 | 923795 ~ 979748 (-) | True | XLOC_003803 |
| TCONS_00007456 | other | upstream | 426140 | 6780708 ~ 6782076 (-) | True | XLOC_003894 |
| TCONS_00007463 | other | upstream | 589732 | 6944300 ~ 6948018 (-) | False | XLOC_003898 |
| TCONS_00007477 | other | upstream | 761679 | 7116247 ~ 7116363 (-) | True | XLOC_003904 |
| TCONS_00007494 | other | upstream | 1756801 | 8111369 ~ 8126195 (-) | True | XLOC_003913 |
| TCONS_00007548 | other | upstream | 4970954 | 11325522 ~ 11331050 (-) | False | XLOC_003936 |
