RNA id: TCONS_00000376



Basic Information


Item Value
RNA id TCONS_00000376
length 1076
RNA type mRNA
GC content 0.47
exon number 4
gene id XLOC_000223
representative True

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 17695426 ~ 17698773 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GCTCTGCGCTTCTGCTTTTTTCATTGTAAACGCATGTGTGCTTGTTTGATTGCAGAACCAACAGCAGAGCAGCCTAAACGAACATCGGTCATCGGAGCTATTTATTATTTGAGAAATTGACCAGACAGTTGATCATGTTTTTGCTTGAGACAGAGTCGCTGGAGCGAATGAGTGATTTGTTTGAAAGCGGATTCGCAGTGAATGGAGGTTTGGATGGTCCCGGACAGTCTCCAGCGCATCTCGCCGCATGCGGAGGTCAGGCGTTCTGTTTGCTTTGGCTCCTCCAAACAGGCGCTGATGCAAAccagcagGACGCAACTGGAGAGACACCCATGCATAAAGCAGCCAGATCGGGCAGTTTGGAGTGCATCAGTGTGTTGATGGCCAGGGATGCACAGTTTAAcATTTGCAACAACGCTGGACAGACTGCTGAGGACATAGCATGGTCTTGTGGGTATGAAGAGTGCGGGAGATTTTTGAACTTGCATCGAAGAACACAGGACTTGAAGAAAGCTTCATCATCATCCTCGTCATCCCTCAGTGAACAGCATGTGTTGACCAGCACTCTCGCAGGACAGAAGAGAGGCCACACAGCCGCCTCTGGTGCCCAAGATGGGAAGAGGGCACGGGACTGGTGAATACAGGTCTCATCAAGACAGAGATCCTAAAATAACAGGTGGTTTAACCATTGCTAGAGTGGAATGGTAAACAGATCTATCAGTATGCCCTTGGAAATAAGCCTACTGTAGCCTCAGAACTGAGAATCAGATGATTTAGGCTGGGGTAAGTGATGTGGAGCCTCCCGATCAAGAGGAATGACTGACACTGGTGGACATTATACCAGTCGATGCAGAACAGAGGAAGAGAAGATCACAACTTCCGGGTTTCTGACTGGAAAGAGTGTAACACTAATTAGGATCACACGCATCTTGTGAACCAATTACTCAGACATCAACTGAAGTACTTTCAGAGTTTTATAGCAGTCAGTTAGCATTGGCAGGGACTGTTGAAATGAGTGGATGCAAATGAgcaaaaccaagcaaaaccaaagACAAACCACTTGCTGTCAAGCTTTC

Function


GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070308-1 Orthologous to human ANKRD37 (ankyrin repeat domain 37).

Ensembl:

ensembl_id ENSDART00000103236

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00003052 lncRNA upstream 1021300 16672089 ~ 16674126 (+) True XLOC_000217
TCONS_00003051 lncRNA upstream 1120497 16573966 ~ 16574929 (+) False XLOC_000215
TCONS_00003050 lncRNA upstream 2259101 15422226 ~ 15436325 (+) True XLOC_000209
TCONS_00002820 lncRNA upstream 2621762 15073400 ~ 15073664 (+) True XLOC_000204
TCONS_00003049 lncRNA upstream 2674004 14851622 ~ 15021422 (+) True XLOC_000203
TCONS_00000380 lncRNA downstream 210286 17909059 ~ 17911739 (+) True XLOC_000226
TCONS_00002822 lncRNA downstream 267341 17966114 ~ 17968446 (+) False XLOC_000227
TCONS_00002821 lncRNA downstream 267341 17966114 ~ 17968446 (+) False XLOC_000227
TCONS_00003053 lncRNA downstream 268138 17966911 ~ 17970284 (+) False XLOC_000227
TCONS_00002823 lncRNA downstream 270383 17969156 ~ 17970275 (+) False XLOC_000227
TCONS_00000375 mRNA upstream 16337 17676745 ~ 17679089 (+) True XLOC_000222
TCONS_00000374 mRNA upstream 100381 17593392 ~ 17595045 (+) True XLOC_000221
TCONS_00000372 mRNA upstream 159119 17527378 ~ 17536307 (+) False XLOC_000220
TCONS_00000373 mRNA upstream 163614 17527931 ~ 17531812 (+) True XLOC_000220
TCONS_00000370 mRNA upstream 163884 17527342 ~ 17531542 (+) False XLOC_000220
TCONS_00000378 mRNA downstream 194171 17892944 ~ 17898227 (+) True XLOC_000225
TCONS_00000379 mRNA downstream 201533 17900306 ~ 17912645 (+) False XLOC_000226
TCONS_00000381 mRNA downstream 535697 18234470 ~ 18315145 (+) True XLOC_000229
TCONS_00000382 mRNA downstream 852091 18550864 ~ 18563321 (+) True XLOC_000231
TCONS_00000383 mRNA downstream 1112906 18811679 ~ 18816806 (+) True XLOC_000232
TCONS_00000369 other upstream 173250 17513515 ~ 17522176 (+) True XLOC_000219
TCONS_00000367 other upstream 926617 16768683 ~ 16768809 (+) True XLOC_000218
TCONS_00000364 other upstream 1080837 16600698 ~ 16614589 (+) True XLOC_000215
TCONS_00000357 other upstream 1236685 16458525 ~ 16458741 (+) True XLOC_000213
TCONS_00000353 other upstream 1533206 16162104 ~ 16162220 (+) True XLOC_000211
TCONS_00000377 other downstream 159607 17858380 ~ 17861928 (+) True XLOC_000224
TCONS_00000400 other downstream 1836347 19535120 ~ 19539639 (+) False XLOC_000244
TCONS_00000408 other downstream 2006926 19705699 ~ 19705832 (+) True XLOC_000247
TCONS_00000413 other downstream 2109678 19808451 ~ 19815449 (+) False XLOC_000250
TCONS_00000414 other downstream 2116092 19814865 ~ 19819096 (+) True XLOC_000250

Expression Profile


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