Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004532 |
| length | 1485 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 13 |
| gene id | XLOC_002408 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 41159241 ~ 41192881 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0005544 | calcium-dependent phospholipid binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030707-1 | Predicted to enable calcium ion binding activity. Predicted to be active in cytoplasm. Is expressed in several structures, including digestive system; endoderm; hatching gland; mesenchymal cell; and pronephric duct. Orthologous to human ANXA4 (annexin A4). |
| ensembl_id | ENSDART00000141657 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00004529 | lncRNA | upstream | 194429 | 40939664 ~ 40964812 (+) | True | XLOC_002406 |
| TCONS_00005733 | lncRNA | upstream | 528747 | 40629830 ~ 40630494 (+) | True | XLOC_002378 |
| TCONS_00005732 | lncRNA | upstream | 622715 | 40535862 ~ 40536526 (+) | True | XLOC_002364 |
| TCONS_00005937 | lncRNA | upstream | 878239 | 40274258 ~ 40281002 (+) | True | XLOC_002361 |
| TCONS_00005936 | lncRNA | upstream | 1024836 | 40122599 ~ 40134405 (+) | False | XLOC_002361 |
| TCONS_00004545 | lncRNA | downstream | 758319 | 41951200 ~ 41954185 (+) | True | XLOC_002416 |
| TCONS_00005938 | lncRNA | downstream | 790116 | 41982997 ~ 41986283 (+) | True | XLOC_002417 |
| TCONS_00004551 | lncRNA | downstream | 1165730 | 42358611 ~ 42361347 (+) | False | XLOC_002421 |
| TCONS_00004552 | lncRNA | downstream | 1169624 | 42362505 ~ 42363321 (+) | True | XLOC_002421 |
| TCONS_00005939 | lncRNA | downstream | 1277735 | 42470616 ~ 42477259 (+) | False | XLOC_002424 |
| TCONS_00004531 | mRNA | upstream | 112466 | 40973652 ~ 41046775 (+) | True | XLOC_002407 |
| TCONS_00004530 | mRNA | upstream | 112845 | 40973524 ~ 41046396 (+) | False | XLOC_002407 |
| TCONS_00004528 | mRNA | upstream | 307564 | 40836378 ~ 40851677 (+) | True | XLOC_002405 |
| TCONS_00004527 | mRNA | upstream | 359384 | 40792078 ~ 40799857 (+) | True | XLOC_002404 |
| TCONS_00004526 | mRNA | upstream | 377128 | 40781052 ~ 40782113 (+) | True | XLOC_002403 |
| TCONS_00004534 | mRNA | downstream | 6779 | 41199660 ~ 41214668 (+) | True | XLOC_002409 |
| TCONS_00004535 | mRNA | downstream | 59644 | 41252525 ~ 41260567 (+) | True | XLOC_002410 |
| TCONS_00004536 | mRNA | downstream | 356938 | 41549819 ~ 41609165 (+) | True | XLOC_002411 |
| TCONS_00004537 | mRNA | downstream | 475602 | 41668483 ~ 41735503 (+) | True | XLOC_002412 |
| TCONS_00004538 | mRNA | downstream | 572735 | 41765616 ~ 41817087 (+) | False | XLOC_002413 |
| TCONS_00004521 | other | upstream | 410343 | 40747873 ~ 40748898 (+) | True | XLOC_002398 |
| TCONS_00004501 | other | upstream | 519437 | 40638776 ~ 40639804 (+) | True | XLOC_002380 |
| TCONS_00004496 | other | upstream | 549288 | 40609461 ~ 40609953 (+) | True | XLOC_002376 |
| TCONS_00004495 | other | upstream | 550524 | 40607701 ~ 40608717 (+) | True | XLOC_002375 |
| TCONS_00004493 | other | upstream | 558739 | 40599935 ~ 40600502 (+) | True | XLOC_002373 |
| TCONS_00004540 | other | downstream | 647038 | 41839919 ~ 41840033 (+) | True | XLOC_002414 |
| TCONS_00004569 | other | downstream | 1844252 | 43037133 ~ 43073256 (+) | False | XLOC_002435 |
| TCONS_00004603 | other | downstream | 3506936 | 44699817 ~ 44713817 (+) | False | XLOC_002452 |
| TCONS_00004611 | other | downstream | 3714887 | 44907768 ~ 44907883 (+) | True | XLOC_002456 |
| TCONS_00004628 | other | downstream | 3983539 | 45176420 ~ 45176924 (+) | True | XLOC_002466 |
