Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004542 |
| length | 1604 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 12 |
| gene id | XLOC_002416 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 41939963 ~ 41959934 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0045444 | fat cell differentiation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005637 | nuclear inner membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-050522-49 | Predicted to be involved in fat cell differentiation. Predicted to be located in nuclear inner membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human TMEM120B (transmembrane protein 120B). |
| ensembl_id | ENSDART00000126248 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00004529 | lncRNA | upstream | 975151 | 40939664 ~ 40964812 (+) | True | XLOC_002406 |
| TCONS_00005733 | lncRNA | upstream | 1309469 | 40629830 ~ 40630494 (+) | True | XLOC_002378 |
| TCONS_00005732 | lncRNA | upstream | 1403437 | 40535862 ~ 40536526 (+) | True | XLOC_002364 |
| TCONS_00005937 | lncRNA | upstream | 1658961 | 40274258 ~ 40281002 (+) | True | XLOC_002361 |
| TCONS_00005936 | lncRNA | upstream | 1805558 | 40122599 ~ 40134405 (+) | False | XLOC_002361 |
| TCONS_00005938 | lncRNA | downstream | 23203 | 41982997 ~ 41986283 (+) | True | XLOC_002417 |
| TCONS_00004551 | lncRNA | downstream | 398817 | 42358611 ~ 42361347 (+) | False | XLOC_002421 |
| TCONS_00004552 | lncRNA | downstream | 402711 | 42362505 ~ 42363321 (+) | True | XLOC_002421 |
| TCONS_00005939 | lncRNA | downstream | 510822 | 42470616 ~ 42477259 (+) | False | XLOC_002424 |
| TCONS_00005940 | lncRNA | downstream | 514425 | 42474219 ~ 42477259 (+) | True | XLOC_002424 |
| TCONS_00004541 | mRNA | upstream | 18546 | 41914084 ~ 41921417 (+) | True | XLOC_002415 |
| TCONS_00004539 | mRNA | upstream | 122854 | 41765944 ~ 41817109 (+) | True | XLOC_002413 |
| TCONS_00004538 | mRNA | upstream | 122876 | 41765616 ~ 41817087 (+) | False | XLOC_002413 |
| TCONS_00004537 | mRNA | upstream | 204460 | 41668483 ~ 41735503 (+) | True | XLOC_002412 |
| TCONS_00004536 | mRNA | upstream | 330798 | 41549819 ~ 41609165 (+) | True | XLOC_002411 |
| TCONS_00004546 | mRNA | downstream | 26891 | 41986685 ~ 42020340 (+) | False | XLOC_002418 |
| TCONS_00004547 | mRNA | downstream | 26915 | 41986709 ~ 42022566 (+) | True | XLOC_002418 |
| TCONS_00004548 | mRNA | downstream | 199677 | 42159471 ~ 42162806 (+) | True | XLOC_002419 |
| TCONS_00004549 | mRNA | downstream | 210188 | 42169982 ~ 42179824 (+) | True | XLOC_002420 |
| TCONS_00004550 | mRNA | downstream | 398632 | 42358426 ~ 42372811 (+) | False | XLOC_002421 |
| TCONS_00004540 | other | upstream | 99930 | 41839919 ~ 41840033 (+) | True | XLOC_002414 |
| TCONS_00004521 | other | upstream | 1191065 | 40747873 ~ 40748898 (+) | True | XLOC_002398 |
| TCONS_00004501 | other | upstream | 1300159 | 40638776 ~ 40639804 (+) | True | XLOC_002380 |
| TCONS_00004496 | other | upstream | 1330010 | 40609461 ~ 40609953 (+) | True | XLOC_002376 |
| TCONS_00004495 | other | upstream | 1331246 | 40607701 ~ 40608717 (+) | True | XLOC_002375 |
| TCONS_00004569 | other | downstream | 1077339 | 43037133 ~ 43073256 (+) | False | XLOC_002435 |
| TCONS_00004603 | other | downstream | 2740023 | 44699817 ~ 44713817 (+) | False | XLOC_002452 |
| TCONS_00004611 | other | downstream | 2947974 | 44907768 ~ 44907883 (+) | True | XLOC_002456 |
| TCONS_00004628 | other | downstream | 3216626 | 45176420 ~ 45176924 (+) | True | XLOC_002466 |
| TCONS_00004629 | other | downstream | 3278162 | 45237956 ~ 45238042 (+) | True | XLOC_002467 |
