Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004585 |
| length | 1246 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 6 |
| gene id | XLOC_002444 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 44042033 ~ 44051808 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0002088 | lens development in camera-type eye | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050522-143 | Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens and solid lens vesicle. Human ortholog(s) of this gene implicated in cataract 23. Orthologous to human CRYBA4 (crystallin beta A4). |
| ensembl_id | ENSDART00000046172 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00004582 | lncRNA | upstream | 17382 | 43993352 ~ 44024651 (+) | True | XLOC_002442 |
| TCONS_00005947 | lncRNA | upstream | 103745 | 43828327 ~ 43938288 (+) | True | XLOC_002441 |
| TCONS_00005946 | lncRNA | upstream | 199831 | 43828327 ~ 43842202 (+) | False | XLOC_002441 |
| TCONS_00005944 | lncRNA | upstream | 516820 | 43518594 ~ 43525213 (+) | False | XLOC_002439 |
| TCONS_00005948 | lncRNA | downstream | 3941 | 44055749 ~ 44057304 (+) | False | XLOC_002445 |
| TCONS_00005949 | lncRNA | downstream | 329174 | 44380982 ~ 44383459 (+) | True | XLOC_002447 |
| TCONS_00004606 | lncRNA | downstream | 715580 | 44767388 ~ 44769521 (+) | True | XLOC_002453 |
| TCONS_00005950 | lncRNA | downstream | 861799 | 44913607 ~ 44917399 (+) | True | XLOC_002457 |
| TCONS_00005951 | lncRNA | downstream | 1089136 | 45140944 ~ 45145137 (+) | True | XLOC_002465 |
| TCONS_00004583 | mRNA | upstream | 45916 | 43994471 ~ 43996117 (+) | False | XLOC_002443 |
| TCONS_00004584 | mRNA | upstream | 46803 | 43994570 ~ 43995230 (+) | True | XLOC_002443 |
| TCONS_00004581 | mRNA | upstream | 233836 | 43797130 ~ 43808197 (+) | True | XLOC_002440 |
| TCONS_00004579 | mRNA | upstream | 591445 | 43406919 ~ 43450588 (+) | False | XLOC_002438 |
| TCONS_00004577 | mRNA | upstream | 593037 | 43406796 ~ 43448996 (+) | False | XLOC_002438 |
| TCONS_00004587 | mRNA | downstream | 5369 | 44057177 ~ 44198211 (+) | False | XLOC_002445 |
| TCONS_00004588 | mRNA | downstream | 5694 | 44057502 ~ 44198211 (+) | False | XLOC_002445 |
| TCONS_00004589 | mRNA | downstream | 94479 | 44146287 ~ 44189349 (+) | True | XLOC_002445 |
| TCONS_00004590 | mRNA | downstream | 311387 | 44363195 ~ 44373370 (+) | False | XLOC_002446 |
| TCONS_00004591 | mRNA | downstream | 321541 | 44373349 ~ 44378081 (+) | True | XLOC_002446 |
| TCONS_00004569 | other | upstream | 968777 | 43037133 ~ 43073256 (+) | False | XLOC_002435 |
| TCONS_00004540 | other | upstream | 2202000 | 41839919 ~ 41840033 (+) | True | XLOC_002414 |
| TCONS_00004521 | other | upstream | 3293135 | 40747873 ~ 40748898 (+) | True | XLOC_002398 |
| TCONS_00004501 | other | upstream | 3402229 | 40638776 ~ 40639804 (+) | True | XLOC_002380 |
| TCONS_00004496 | other | upstream | 3432080 | 40609461 ~ 40609953 (+) | True | XLOC_002376 |
| TCONS_00004603 | other | downstream | 648009 | 44699817 ~ 44713817 (+) | False | XLOC_002452 |
| TCONS_00004611 | other | downstream | 855960 | 44907768 ~ 44907883 (+) | True | XLOC_002456 |
| TCONS_00004628 | other | downstream | 1124612 | 45176420 ~ 45176924 (+) | True | XLOC_002466 |
| TCONS_00004629 | other | downstream | 1186148 | 45237956 ~ 45238042 (+) | True | XLOC_002467 |
