Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000450 |
| length | 894 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 3 |
| gene id | XLOC_000273 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 22842935 ~ 22876174 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ZDB-GENE-030131-6794 | Predicted to enable DNA binding activity. Predicted to be involved in transcription initiation from RNA polymerase II promoter. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIIE complex. Human ortholog(s) of this gene implicated in nonphotosensitive trichothiodystrophy 6. Orthologous to human GTF2E2 (general transcription factor IIE subunit 2). |
| ensembl_id | ENSDART00000138235 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003067 | lncRNA | upstream | 332991 | 22510734 ~ 22518754 (+) | False | XLOC_000269 |
| TCONS_00003068 | lncRNA | upstream | 332991 | 22511061 ~ 22518754 (+) | True | XLOC_000269 |
| TCONS_00000439 | lncRNA | upstream | 898282 | 21951258 ~ 21953463 (+) | True | XLOC_000266 |
| TCONS_00003066 | lncRNA | upstream | 1350261 | 21500645 ~ 21501484 (+) | True | XLOC_000263 |
| TCONS_00003065 | lncRNA | upstream | 1510092 | 21331604 ~ 21341653 (+) | True | XLOC_000262 |
| TCONS_00000462 | lncRNA | downstream | 520108 | 23379008 ~ 23380210 (+) | True | XLOC_000278 |
| TCONS_00000466 | lncRNA | downstream | 630211 | 23489111 ~ 23506518 (+) | False | XLOC_000281 |
| TCONS_00000468 | lncRNA | downstream | 646766 | 23505666 ~ 23506518 (+) | True | XLOC_000281 |
| TCONS_00002830 | lncRNA | downstream | 1259467 | 24118367 ~ 24119067 (+) | True | XLOC_000288 |
| TCONS_00003069 | lncRNA | downstream | 1267480 | 24126380 ~ 24144170 (+) | True | XLOC_000289 |
| TCONS_00000447 | mRNA | upstream | 148362 | 22691256 ~ 22703383 (+) | True | XLOC_000272 |
| TCONS_00000445 | mRNA | upstream | 186647 | 22654875 ~ 22665098 (+) | False | XLOC_000271 |
| TCONS_00000446 | mRNA | upstream | 187573 | 22654908 ~ 22664172 (+) | True | XLOC_000271 |
| TCONS_00000443 | mRNA | upstream | 422892 | 22427135 ~ 22428853 (+) | True | XLOC_000268 |
| TCONS_00000442 | mRNA | upstream | 672190 | 22174251 ~ 22179555 (+) | True | XLOC_000267 |
| TCONS_00000452 | mRNA | downstream | 302469 | 23161369 ~ 23239849 (+) | False | XLOC_000274 |
| TCONS_00000453 | mRNA | downstream | 303224 | 23162124 ~ 23239849 (+) | False | XLOC_000274 |
| TCONS_00000454 | mRNA | downstream | 371559 | 23230459 ~ 23240046 (+) | True | XLOC_000274 |
| TCONS_00000455 | mRNA | downstream | 402957 | 23261857 ~ 23292761 (+) | True | XLOC_000275 |
| TCONS_00000456 | mRNA | downstream | 415810 | 23274710 ~ 23283468 (+) | False | XLOC_000276 |
| TCONS_00000444 | other | upstream | 330419 | 22521212 ~ 22521326 (+) | True | XLOC_000270 |
| TCONS_00000435 | other | upstream | 1285144 | 21564506 ~ 21566601 (+) | True | XLOC_000264 |
| TCONS_00000430 | other | upstream | 1597263 | 21254353 ~ 21254482 (+) | True | XLOC_000260 |
| TCONS_00000420 | other | upstream | 2870758 | 19975591 ~ 19980987 (+) | True | XLOC_000252 |
| TCONS_00000414 | other | upstream | 3032649 | 19814865 ~ 19819096 (+) | True | XLOC_000250 |
| TCONS_00000457 | other | downstream | 416022 | 23274922 ~ 23279702 (+) | True | XLOC_000276 |
| TCONS_00000467 | other | downstream | 645434 | 23504334 ~ 23505103 (+) | False | XLOC_000281 |
| TCONS_00000472 | other | downstream | 892199 | 23751099 ~ 23751213 (+) | True | XLOC_000283 |
| TCONS_00000478 | other | downstream | 1007978 | 23866878 ~ 23866965 (+) | True | XLOC_000285 |
| TCONS_00000480 | other | downstream | 1255625 | 24114525 ~ 24114558 (+) | True | XLOC_000287 |
